RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 SCRN1Q12765 414 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 NTRK3Q16288 839 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 TEX2Q8IWB9 1127 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 MORC4Q8TE76 937 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 BARHL2Q9NY43 387 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 LIMCH1Q9UPQ0 1083 aa18.42■□□□□ 0.54
PPFIA3-213ENST00000602905 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 EIF2AK2P19525 551 aaKnown RBP18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 ADCY7P51828 1080 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 STXBP2Q15833 593 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 EEPD1Q7L9B9 569 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 ZSCAN31Q96LW9 406 aaPredicted RBP18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 KIF2CQ99661 725 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 CRISPLD2Q9H0B8 497 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 EHMT1Q9H9B1 1298 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 PXMP2Q9NR77 195 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 ASTN1O14525 1302 aa18.41■□□□□ 0.54
PPFIA3-213ENST00000602905 SMCO2A6NFE2 343 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 STXBP3O00186 592 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 DEXIO95424 95 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 ME3Q16798 604 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 CCDC144BQ3MJ40 725 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 FBXO16Q8IX29 292 aaPredicted RBP18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 KIAA1217Q5T5P2 1943 aa18.4■□□□□ 0.54
PPFIA3-213ENST00000602905 SPDYE3A6NKU9 549 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 NR3C2P08235 984 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 EDNRBP24530 442 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 ANO1Q5XXA6 986 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 LHX8Q68G74 356 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 IQSEC1Q6DN90 963 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 USP17L6PQ6QN14 398 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 ARRDC4Q8NCT1 418 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 C6orf50Q9HD87 102 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 LRRC37A2A6NM11 1700 aa18.39■□□□□ 0.53
PPFIA3-213ENST00000602905 MEIS2O14770 477 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 MYCLP12524 364 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 XBP1P17861 261 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 GNA11P29992 359 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 CCND2P30279 289 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 TNFAIP2Q03169 654 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 PKN1Q16512 942 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 WASF1Q92558 559 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 SHISA4Q96DD7 197 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 PDCD2LQ9BRP1 358 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 XPNPEP3Q9NQH7 507 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 SH3GLB2Q9NR46 395 aa18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-213ENST00000602905 DUSP11O75319 330 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 EIF3JO75822 258 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 FOSP01100 380 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 RGS19P49795 217 aa18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 PGM5Q15124 567 aa18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 SCFD2Q8WU76 684 aa18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 DDX49Q9Y6V7 483 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-213ENST00000602905 ESYT2A0FGR8 921 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 KBTBD13C9JR72 458 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 LARGE1O95461 756 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 ADCYAP1R1P41586 468 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 MCM2P49736 904 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 NLRP5P59047 1200 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 TTLL4Q14679 1199 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 UBE2SQ16763 222 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 TYW1BQ6NUM6 668 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 TAPT1Q6NXT6 567 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 NECAB2Q7Z6G3 386 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 RNF180Q86T96 592 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 FAM177A1Q8N128 213 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 AP5M1Q9H0R1 490 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 PDGFCQ9NRA1 345 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 STK36Q9NRP7 1315 aa18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
PPFIA3-213ENST00000602905 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 STAM2O75886 525 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 AP3B2Q13367 1082 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 VPS54Q9P1Q0 977 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 PCDHA6Q9UN73 950 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 PCDHA8Q9Y5H6 950 aa18.35■□□□□ 0.53
PPFIA3-213ENST00000602905 FRMPD4Q14CM0 1322 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 MYH7BA7E2Y1 1941 aa18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 RBM47A0AV96 593 aaKnown RBP18.34■□□□□ 0.53
PPFIA3-213ENST00000602905 DNM1LO00429 736 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms