RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 INTS4Q96HW7 963 aaKnown RBP25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 PHF20Q9BVI0 1012 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 TMEM260Q9NX78 707 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 PCDHA4Q9UN74 947 aa25.35■■□□□ 1.65
CHMP2A-204ENST00000597848 EIF2AK2P19525 551 aaKnown RBP25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 CYP2C19P33261 490 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 KRT40Q6A162 431 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 BLIDQ8IZY5 108 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 SH3TC2Q8TF17 1288 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 MCOLN1Q9GZU1 580 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 ASTN1O14525 1302 aa25.34■■□□□ 1.65
CHMP2A-204ENST00000597848 FOSP01100 380 aaPredicted RBP25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 HMGCRP04035 888 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 GUCY1B3Q02153 619 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 ARMCX2Q7L311 632 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 MSL3Q8N5Y2 521 aaKnown RBP25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 PXMP2Q9NR77 195 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 PCDHA6Q9UN73 950 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 PCDHA8Q9Y5H6 950 aa25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 DDX49Q9Y6V7 483 aaKnown RBP25.33■■□□□ 1.65
CHMP2A-204ENST00000597848 ADAMTS3O15072 1205 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 UBXN2AP68543 259 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 PDE4DQ08499 809 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 MAMDC4Q6UXC1 1216 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 SPRYD3Q8NCJ5 442 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 RASGRP4Q8TDF6 673 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 PGBD1Q96JS3 809 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 EHMT1Q9H9B1 1298 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 BRMS1Q9HCU9 246 aa25.32■■□□□ 1.64
CHMP2A-204ENST00000597848 MYCLP12524 364 aaPredicted RBP25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 CLK2P49760 499 aaKnown RBP25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 TRIM32Q13049 653 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 AP3B2Q13367 1082 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 SAFBQ15424 915 aaKnown RBP eCLIP25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 MCTP2Q6DN12 878 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 DAGLBQ8NCG7 672 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 IWS1Q96ST2 819 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 CNPY2Q9Y2B0 182 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 SYNGAP1Q96PV0 1343 aa25.31■■□□□ 1.64
CHMP2A-204ENST00000597848 LOC102724159A0A0B4J2E5 919 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 SNAI1O95863 264 aaPredicted RBP25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 MMP1P03956 469 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 INHAP05111 366 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 NR3C2P08235 984 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 KRT2P35908 639 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 PWP2Q15269 919 aaKnown RBP25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 PRAMEF19Q5SWL8 479 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 COL13A1Q5TAT6 717 aaPredicted RBP25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 LARP1BQ659C4 914 aaKnown RBP25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 FBXO18Q8NFZ0 1043 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 PDCD2LQ9BRP1 358 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 ANO3Q9BYT9 981 aa25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 RBBP6Q7Z6E9 1792 aaKnown RBP25.3■■□□□ 1.64
CHMP2A-204ENST00000597848 PRKAR2AP13861 404 aaKnown RBP25.29■■□□□ 1.64
CHMP2A-204ENST00000597848 CACNB2Q08289 660 aaPredicted RBP25.29■■□□□ 1.64
CHMP2A-204ENST00000597848 PGM5Q15124 567 aa25.29■■□□□ 1.64
CHMP2A-204ENST00000597848 NPY5RQ15761 445 aa25.29■■□□□ 1.64
CHMP2A-204ENST00000597848 EEPD1Q7L9B9 569 aa25.29■■□□□ 1.64
CHMP2A-204ENST00000597848 PLXNA1Q9UIW2 1896 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 H3BQV1 296 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 MYCP01106 439 aaPredicted RBP25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 IGHA2P01877 340 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 CCND2P30279 289 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 ANP32AP39687 249 aaKnown RBP25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 STXBP2Q15833 593 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 IFFO2Q5TF58 517 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 OXER1Q8TDS5 423 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 MORC4Q8TE76 937 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 ZHX1Q9UKY1 873 aaPredicted RBP25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 RPTORQ8N122 1335 aa25.28■■□□□ 1.64
CHMP2A-204ENST00000597848 EDNRBP24530 442 aa25.27■■□□□ 1.64
CHMP2A-204ENST00000597848 DIS3L2Q8IYB7 885 aaKnown RBP25.27■■□□□ 1.64
CHMP2A-204ENST00000597848 IL31RAQ8NI17 732 aa25.27■■□□□ 1.64
CHMP2A-204ENST00000597848 ABHD16BQ9H3Z7 469 aa25.27■■□□□ 1.64
CHMP2A-204ENST00000597848 CCDC194A0A1B0GVG4 234 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 BTBD18B2RXH4 712 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 PDCP20941 246 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 CNGA1P29973 690 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 ACVR2BQ13705 512 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 GNL2Q13823 731 aaKnown RBP25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 KRT25Q7Z3Z0 450 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 VSIG10LQ86VR7 867 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 ZFP91Q96JP5 570 aaPredicted RBP25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 FRMPD4Q14CM0 1322 aa25.26■■□□□ 1.63
CHMP2A-204ENST00000597848 M0R2N6 131 aa25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 EIF3JO75822 258 aaKnown RBP25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 NR5A1Q13285 461 aa25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 FBXO16Q8IX29 292 aaPredicted RBP25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 NRBP1Q9UHY1 535 aa25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 LCTP09848 1927 aa25.25■■□□□ 1.63
CHMP2A-204ENST00000597848 CYBAP13498 195 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 SREBF1P36956 1147 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 ARHGAP4P98171 946 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 NONOQ15233 471 aaKnown RBP eCLIP25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 MAP3K21Q5TCX8 1036 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 PCNX4Q63HM2 1172 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 MCTP1Q6DN14 999 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 XRRA1Q6P2D8 792 aa25.24■■□□□ 1.63
CHMP2A-204ENST00000597848 TRPV1Q8NER1 839 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms