RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 ESYT2A0FGR8 921 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 SPDYE3A6NKU9 549 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 UBXN2AP68543 259 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 TRIM29Q14134 588 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 ARMCX2Q7L311 632 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 SAMD3Q8N6K7 520 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 SNX21Q969T3 373 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 SH3GLB2Q9NR46 395 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 MAP3K20Q9NYL2 800 aaKnown RBP25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 KIAA1217Q5T5P2 1943 aa25.75■■□□□ 1.71
R3HDM4-205ENST00000589445 SYNGAP1Q96PV0 1343 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 ASB14A6NK59 587 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 PIK3CDO00329 1044 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 MEIS2O14770 477 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 PDE4DQ08499 809 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 REXO1Q8N1G1 1221 aaKnown RBP25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 DNERQ8NFT8 737 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 PGBD1Q96JS3 809 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 GLT8D2Q9H1C3 349 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 PXMP2Q9NR77 195 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 KCNJ14Q9UNX9 436 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 CNPY2Q9Y2B0 182 aa25.74■■□□□ 1.71
R3HDM4-205ENST00000589445 GNA11P29992 359 aa25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 NSUN6Q8TEA1 469 aaKnown RBP25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 ZMYND12Q9H0C1 365 aa25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 TMEM260Q9NX78 707 aa25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 ZHX1Q9UKY1 873 aaPredicted RBP25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 SMC3Q9UQE7 1217 aa25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 MYH7BA7E2Y1 1941 aa25.73■■□□□ 1.71
R3HDM4-205ENST00000589445 EEPD1Q7L9B9 569 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 FBXO16Q8IX29 292 aaPredicted RBP25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 MSL3Q8N5Y2 521 aaKnown RBP25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 BICD2Q8TD16 824 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 RASGRP4Q8TDF6 673 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 EHMT1Q9H9B1 1298 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 FOXD4L1Q9NU39 408 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 KIF3AQ9Y496 699 aa25.72■■□□□ 1.71
R3HDM4-205ENST00000589445 B4DLN1 442 aa25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 MYCLP12524 364 aaPredicted RBP25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 GUCY1B3Q02153 619 aa25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 CACNB2Q08289 660 aaPredicted RBP25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 JAKMIP3Q5VZ66 844 aa25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 MAMDC4Q6UXC1 1216 aa25.71■■□□□ 1.71
R3HDM4-205ENST00000589445 ADAMTS3O15072 1205 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 HSP90AA1P07900 732 aaKnown RBP25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 GJB2P29033 226 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 CNGA1P29973 690 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 AP3B2Q13367 1082 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 PRAMEF19Q5SWL8 479 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 IL31RAQ8NI17 732 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 ARMC5Q96C12 935 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 ZNF333Q96JL9 665 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 C8orf76Q96K31 380 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 PHF20Q9BVI0 1012 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 ANO3Q9BYT9 981 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 PCDHA4Q9UN74 947 aa25.7■■□□□ 1.7
R3HDM4-205ENST00000589445 FRMPD4Q14CM0 1322 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 CYBAP13498 195 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 CUL4AQ13619 759 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 PGM5Q15124 567 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 PDCD2LQ9BRP1 358 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 UNC93B1Q9H1C4 597 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 BRMS1Q9HCU9 246 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 PCDHA6Q9UN73 950 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 PCDHA8Q9Y5H6 950 aa25.69■■□□□ 1.7
R3HDM4-205ENST00000589445 RPTORQ8N122 1335 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 LOC102724159A0A0B4J2E5 919 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 SNAI1O95863 264 aaPredicted RBP25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 CCL5P13501 91 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 CCND2P30279 289 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 CCND3P30281 292 aaPredicted RBP25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 PWP2Q15269 919 aaKnown RBP25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 MTFR1Q15390 333 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 BLIDQ8IZY5 108 aa25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 FAM177A1Q8N128 213 aaPredicted RBP25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.68■■□□□ 1.75e-7■■■■■ 47.8
R3HDM4-205ENST00000589445 HMX1Q9NP08 348 aaPredicted RBP25.68■■□□□ 1.7
R3HDM4-205ENST00000589445 FOSP01100 380 aaPredicted RBP25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 EDNRBP24530 442 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 CLK2P49760 499 aaKnown RBP25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 MAP3K21Q5TCX8 1036 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 KRT40Q6A162 431 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 TEX2Q8IWB9 1127 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 DAGLBQ8NCG7 672 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 TRPV1Q8NER1 839 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 IWS1Q96ST2 819 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 ABHD16BQ9H3Z7 469 aa25.67■■□□□ 1.7
R3HDM4-205ENST00000589445 IGHA2P01877 340 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 NR3C2P08235 984 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 KRT2P35908 639 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 ACVR2BQ13705 512 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 STXBP2Q15833 593 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 GALNT17Q6IS24 598 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 ZFP91Q96JP5 570 aaPredicted RBP25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 RNF208Q9H0X6 261 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 VTA1Q9NP79 307 aa25.66■■□□□ 1.7
R3HDM4-205ENST00000589445 MMP1P03956 469 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms