RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 DZIP1Q86YF9 867 aaKnown RBP10.11□□□□□ -0.79
DNMT1-219ENST00000589349 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
DNMT1-219ENST00000589349 ADAM19Q9H013 955 aa10.11□□□□□ -0.79
DNMT1-219ENST00000589349 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
DNMT1-219ENST00000589349 DENND2AQ9ULE3 1009 aa10.11□□□□□ -0.79
DNMT1-219ENST00000589349 PPP2R3BQ9Y5P8 575 aa10.11□□□□□ -0.79
DNMT1-219ENST00000589349 C1QTNF9BB2RNN3 333 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 C9orf172C9J069 976 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 TBC1D8O95759 1140 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 POLR3DP05423 398 aaPredicted RBP10.1□□□□□ -0.79
DNMT1-219ENST00000589349 FGFR2P21802 821 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 PHKA1P46020 1223 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 SREBF2Q12772 1141 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 TCP10Q12799 353 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 GRIK4Q16099 956 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 CD163Q86VB7 1156 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 ZBED3Q96IU2 234 aaPredicted RBP10.1□□□□□ -0.79
DNMT1-219ENST00000589349 TMEM39BQ9GZU3 492 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 COPRSQ9NQ92 184 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 CSADQ9Y600 493 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 PCNTO95613 3336 aa10.1□□□□□ -0.79
DNMT1-219ENST00000589349 AOX1Q06278 1338 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 ZBED9Q6R2W3 1325 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 A0A1B0GUL7 405 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 EIF1AYO14602 144 aaKnown RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 MSTNO14793 375 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 CHRNA4P43681 627 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 MVPQ14764 893 aaKnown RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 PEAR1Q5VY43 1037 aaPredicted RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 SND1Q7KZF4 910 aaKnown RBP eCLIP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 ZGPATQ8N5A5 531 aaKnown RBP10.09□□□□□ -0.79
DNMT1-219ENST00000589349 NXPE3Q969Y0 559 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 CLMNQ96JQ2 1002 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 PSME4Q14997 1843 aa10.09□□□□□ -0.79
DNMT1-219ENST00000589349 PNMA6EA0A0J9YXQ4 647 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 HDLBPQ00341 1268 aaKnown RBP10.08□□□□□ -0.8
DNMT1-219ENST00000589349 TTC39AQ5SRH9 613 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 SPTY2D1Q68D10 685 aaPredicted RBP10.08□□□□□ -0.8
DNMT1-219ENST00000589349 MIGA2Q7L4E1 593 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 ANKRD13AQ8IZ07 590 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 PANK1Q8TE04 598 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 LENG1Q96BZ8 264 aaPredicted RBP10.08□□□□□ -0.8
DNMT1-219ENST00000589349 HOOK2Q96ED9 719 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 ABHD8Q96I13 439 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 ZDHHC15Q96MV8 337 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 BHLHE41Q9C0J9 482 aaPredicted RBP10.08□□□□□ -0.8
DNMT1-219ENST00000589349 LATS2Q9NRM7 1088 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 RAI14Q9P0K7 980 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 SUGT1Q9Y2Z0 365 aa10.08□□□□□ -0.8
DNMT1-219ENST00000589349 PAPPA2Q9BXP8 1791 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 LINC01387J3KSC0 135 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 TREHO43280 583 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 DEAF1O75398 565 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-219ENST00000589349 USP2O75604 605 aaPredicted RBP10.07□□□□□ -0.8
DNMT1-219ENST00000589349 ITGB2P05107 769 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 PRDX5P30044 214 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 PLCB3Q01970 1234 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 OTUD7BQ6GQQ9 843 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 IGF2-ASQ6U949 168 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 BSNDQ8WZ55 320 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 ASB16Q96NS5 453 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 HHIPQ96QV1 700 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
DNMT1-219ENST00000589349 SAGE1Q9NXZ1 904 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
DNMT1-219ENST00000589349 COL1A1P02452 1464 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-219ENST00000589349 MANSC4A6NHS7 340 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-219ENST00000589349 H3BRJ5 948 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 EPHA1P21709 976 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 ATP8B2P98198 1209 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 PICALMQ13492 652 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 DSC3Q14574 896 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 DCAF15Q66K64 600 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 WNT8BQ93098 351 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 CCDC74AQ96AQ1 378 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 OPTNQ96CV9 577 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 SPOCK3Q9BQ16 436 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 NPHS2Q9NP85 383 aa10.06□□□□□ -0.8
DNMT1-219ENST00000589349 SH2B1Q9NRF2 756 aaPredicted RBP10.06□□□□□ -0.8
DNMT1-219ENST00000589349 A0A1W2PP55 124 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 DLL1O00548 723 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
DNMT1-219ENST00000589349 RLBP1P12271 317 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 SELPP16109 830 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 RASGRF1Q13972 1273 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
DNMT1-219ENST00000589349 CDC42EP5Q6NZY7 148 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 SPATA5Q8NB90 893 aa10.05□□□□□ -0.8
DNMT1-219ENST00000589349 KLHL23Q8NBE8 558 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms