RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 ARHGEF1Q92888 912 aaKnown RBP20.53■□□□□ 0.88
CACTIN-204ENST00000585942 CCDC42Q96M95 316 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 NUP58Q9BVL2 599 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 SPZ1Q9BXG8 430 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 CUEDC2Q9H467 287 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 MYMKA6NI61 221 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 RPS6KA5O75582 802 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 PPP4CP60510 307 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
CACTIN-204ENST00000585942 ZSCAN29Q8IWY8 852 aaPredicted RBP20.53■□□□□ 0.88
CACTIN-204ENST00000585942 RRP36Q96EU6 259 aaKnown RBP20.53■□□□□ 0.88
CACTIN-204ENST00000585942 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.88
CACTIN-204ENST00000585942 CLGNO14967 610 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 C2orf54Q08AI8 447 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 GRB10Q13322 594 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 CCDC47Q96A33 483 aaKnown RBP20.52■□□□□ 0.88
CACTIN-204ENST00000585942 COA7Q96BR5 231 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 PSMB7Q99436 277 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 NUDT12Q9BQG2 462 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 PLEKHA4Q9H4M7 779 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 BLOC1S4Q9NUP1 217 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 ARHGAP20Q9P2F6 1191 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 MYH1P12882 1939 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 GNA11P29992 359 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 KIF5AQ12840 1032 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 SOGA3Q5TF21 947 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.52■□□□□ 0.88
CACTIN-204ENST00000585942 BARGINQ6ZT62 677 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 RETREG2Q8NC44 543 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 GJA10Q969M2 543 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 ERGIC2Q96RQ1 377 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 MLXIPQ9HAP2 919 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
CACTIN-204ENST00000585942 CAPN6Q9Y6Q1 641 aa20.52■□□□□ 0.88
CACTIN-204ENST00000585942 POTEMA6NI47 508 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 SLC37A4O43826 429 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 SYF2O95926 243 aaKnown RBP20.51■□□□□ 0.87
CACTIN-204ENST00000585942 EP400NLQ6ZTU2 488 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 CCDC155Q8N6L0 562 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 MYH10P35580 1976 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 TDP2O95551 362 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 LRRC41Q15345 812 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 REXO1Q8N1G1 1221 aaKnown RBP20.51■□□□□ 0.87
CACTIN-204ENST00000585942 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
CACTIN-204ENST00000585942 CALML4Q96GE6 196 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 UIMC1Q96RL1 719 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 MMRN2Q9H8L6 949 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 FAM204AQ9H8W3 233 aa20.51■□□□□ 0.87
CACTIN-204ENST00000585942 EDIL3O43854 480 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
CACTIN-204ENST00000585942 FKBP15Q5T1M5 1219 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 CENPPQ6IPU0 288 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 CNNM4Q6P4Q7 775 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 SV2BQ7L1I2 683 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 CLEC10AQ8IUN9 316 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 FAM114A1Q8IWE2 563 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 TEX11Q8IYF3 940 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 PNMA5Q96PV4 448 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 TUBBP07437 444 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 VAV2P52735 878 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 GSTO1P78417 241 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 AMPD3Q01432 767 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 EZH2Q15910 746 aaKnown RBP20.5■□□□□ 0.87
CACTIN-204ENST00000585942 LRRC31Q6UY01 552 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 ZNF662Q6ZS27 426 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 C16orf86Q6ZW13 317 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 EHBP1Q8NDI1 1231 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 FAM71BQ8TC56 605 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 COG1Q8WTW3 980 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 NDST4Q9H3R1 872 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 SMARCAL1Q9NZC9 954 aa20.5■□□□□ 0.87
CACTIN-204ENST00000585942 CXCR5P32302 372 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 VWA3BQ502W6 1294 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 ANKRD13CQ8N6S4 541 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 NEDD1Q8NHV4 660 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 HDAC7Q8WUI4 952 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 PURBQ96QR8 312 aaKnown RBP20.49■□□□□ 0.87
CACTIN-204ENST00000585942 PLAGL2Q9UPG8 496 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 RNF40O75150 1001 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 MOCS3O95396 460 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 SPA17Q15506 151 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 MCTP2Q6DN12 878 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 KCNK18Q7Z418 384 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 CCDC91Q7Z6B0 441 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 SUGP1Q8IWZ8 645 aaKnown RBP20.49■□□□□ 0.87
CACTIN-204ENST00000585942 IFIH1Q9BYX4 1025 aaKnown RBP20.49■□□□□ 0.87
CACTIN-204ENST00000585942 HPCAL4Q9UM19 191 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 SIK3Q9Y2K2 1263 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 RTCBQ9Y3I0 505 aaKnown RBP20.49■□□□□ 0.87
CACTIN-204ENST00000585942 EIF4A3P38919 411 aaKnown RBP20.49■□□□□ 0.87
CACTIN-204ENST00000585942 CALCRLQ16602 461 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 MMS22LQ6ZRQ5 1243 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 MTMR9Q96QG7 549 aa20.49■□□□□ 0.87
CACTIN-204ENST00000585942 EHD2Q9NZN4 543 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms