RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 PFKMP08237 780 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 RILPL2Q969X0 211 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 TTC14Q96N46 770 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 ASB2Q96Q27 587 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 LNPKQ9C0E8 428 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 UBA5Q9GZZ9 404 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 PNMA2Q9UL42 364 aa19.46■□□□□ 0.71
CCDC57-219ENST00000584717 NKRFO15226 690 aaKnown RBP eCLIP19.45■□□□□ 0.7
CCDC57-219ENST00000584717 ARIH2O95376 493 aa19.45■□□□□ 0.7
CCDC57-219ENST00000584717 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
CCDC57-219ENST00000584717 CHMP4BP1P59074 171 aa19.45■□□□□ 0.7
CCDC57-219ENST00000584717 MRPS5P82675 430 aaKnown RBP19.45■□□□□ 0.7
CCDC57-219ENST00000584717 HDAC1Q13547 482 aaPredicted RBP19.45■□□□□ 0.7
CCDC57-219ENST00000584717 DNERQ8NFT8 737 aa19.45■□□□□ 0.7
CCDC57-219ENST00000584717 LAMA4Q16363 1823 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 A6NJR5 290 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 CA3P07451 260 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 PCP11498 1178 aaKnown RBP19.44■□□□□ 0.7
CCDC57-219ENST00000584717 GPATCH4Q5T3I0 446 aaKnown RBP19.44■□□□□ 0.7
CCDC57-219ENST00000584717 NFRKBQ6P4R8 1299 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 ADAMTS19Q8TE59 1207 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 ESR2Q92731 530 aa19.44■□□□□ 0.7
CCDC57-219ENST00000584717 RNF41Q9H4P4 317 aaPredicted RBP19.44■□□□□ 0.7
CCDC57-219ENST00000584717 NCOR1O75376 2440 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 ACTN1P12814 892 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 TMEM67Q5HYA8 995 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 TICAM2Q86XR7 235 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 TBC1D5Q92609 795 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 CERS4Q9HA82 394 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 NOD1Q9Y239 953 aa19.43■□□□□ 0.7
CCDC57-219ENST00000584717 B4DLN1 442 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 RFXAPO00287 272 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 KPNA6O60684 536 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 IQCF3P0C7M6 154 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 RFC2P35250 354 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 MRPL12P52815 198 aaKnown RBP19.42■□□□□ 0.7
CCDC57-219ENST00000584717 CDC37Q16543 378 aaPredicted RBP19.42■□□□□ 0.7
CCDC57-219ENST00000584717 RETREG2Q8NC44 543 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 PNMA1Q8ND90 353 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
CCDC57-219ENST00000584717 FTOQ9C0B1 505 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCDC57-219ENST00000584717 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 ZNF213O14771 459 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 SDSP20132 328 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
CCDC57-219ENST00000584717 PTPN11Q06124 597 aaPredicted RBP19.41■□□□□ 0.7
CCDC57-219ENST00000584717 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 TET1Q8NFU7 2136 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 AFG1LQ8WV93 481 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 UHRF1Q96T88 793 aaPredicted RBP19.41■□□□□ 0.7
CCDC57-219ENST00000584717 COL20A1Q9P218 1284 aa19.41■□□□□ 0.7
CCDC57-219ENST00000584717 KDM4AO75164 1064 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 MMP3P08254 477 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 LY6KQ17RY6 165 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 CCDC62Q6P9F0 684 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 CHST3Q7LGC8 479 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 DGKHQ86XP1 1220 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 ADGRF4Q8IZF3 695 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
CCDC57-219ENST00000584717 TAAR1Q96RJ0 339 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 SLC9A7Q96T83 725 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 TSPYL2Q9H2G4 693 aaPredicted RBP19.4■□□□□ 0.7
CCDC57-219ENST00000584717 KAT14Q9H8E8 782 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 ABCB11O95342 1321 aa19.4■□□□□ 0.7
CCDC57-219ENST00000584717 PRRC2BQ5JSZ5 2229 aaKnown RBP19.4■□□□□ 0.7
CCDC57-219ENST00000584717 EPOPA6NHQ4 379 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 ARHGEF15O94989 841 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
CCDC57-219ENST00000584717 TFF2Q03403 129 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 ARHGAP1Q07960 439 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 BFSP2Q13515 415 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 SKIV2LQ15477 1246 aaKnown RBP19.39■□□□□ 0.69
CCDC57-219ENST00000584717 PTGISQ16647 500 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 IQCA1Q86XH1 822 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 MYH6P13533 1939 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.69
CCDC57-219ENST00000584717 TRIP12Q14669 1992 aaPredicted RBP19.39■□□□□ 0.69
CCDC57-219ENST00000584717 B4E1Z4 1266 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 DHX16O60231 1041 aaKnown RBP19.38■□□□□ 0.69
CCDC57-219ENST00000584717 GH1P01241 217 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 PTPRSQ13332 1948 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 QRICH1Q2TAL8 776 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 GDF6Q6KF10 455 aaPredicted RBP19.38■□□□□ 0.69
CCDC57-219ENST00000584717 CWC27Q6UX04 472 aaKnown RBP19.38■□□□□ 0.69
CCDC57-219ENST00000584717 HERC6Q8IVU3 1022 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 NSUN6Q8TEA1 469 aaKnown RBP19.38■□□□□ 0.69
CCDC57-219ENST00000584717 ARNTL2Q8WYA1 636 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 VAT1LQ9HCJ6 419 aa19.38■□□□□ 0.69
CCDC57-219ENST00000584717 TCF20Q9UGU0 1960 aaKnown RBP19.38■□□□□ 0.69
CCDC57-219ENST00000584717 EIF2AK2P19525 551 aaKnown RBP19.37■□□□□ 0.69
CCDC57-219ENST00000584717 COL9A1P20849 921 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 STXBP2Q15833 593 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 CCDC178Q5BJE1 867 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 KRT40Q6A162 431 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
CCDC57-219ENST00000584717 PHOSPHO2Q8TCD6 241 aa19.37■□□□□ 0.69
CCDC57-219ENST00000584717 NECAB3Q96P71 396 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms