RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
CTC1-212ENST00000584439 ZGPATQ8N5A5 531 aaKnown RBP7.56□□□□□ -1.2
CTC1-212ENST00000584439 MMP19Q99542 508 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 UPF3AQ9H1J1 476 aaKnown RBP7.56□□□□□ -1.2
CTC1-212ENST00000584439 MROH8Q9H579 483 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 SCUBE2Q9NQ36 999 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 AATFQ9NY61 560 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTC1-212ENST00000584439 SLC5A4Q9NY91 659 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 LMCD1Q9NZU5 365 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 ZHX1Q9UKY1 873 aaPredicted RBP7.56□□□□□ -1.2
CTC1-212ENST00000584439 FAM184BQ9ULE4 1060 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.2
CTC1-212ENST00000584439 KIAA1671Q9BY89 1806 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 MYH4Q9Y623 1939 aa7.56□□□□□ -1.2
CTC1-212ENST00000584439 PTPRCP08575 1304 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 PROB1E7EW31 1015 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 LTBRP36941 435 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 GJA9P57773 515 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 ITGA7Q13683 1181 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 TCTN1Q2MV58 587 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 TMEM63BQ5T3F8 832 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 TATDN1Q6P1N9 297 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 TMED8Q6PL24 325 aaPredicted RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 TRIM67Q6ZTA4 783 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 EP400NLQ6ZTU2 488 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 DEPDC4Q8N2C3 294 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 PCSK9Q8NBP7 692 aaKnown RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 DHX38Q92620 1227 aaKnown RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 RMDN1Q96DB5 314 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 SLC9A7Q96T83 725 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 DHX36Q9H2U1 1008 aaKnown RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 HMG20BQ9P0W2 317 aa7.55□□□□□ -1.2
CTC1-212ENST00000584439 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
CTC1-212ENST00000584439 PDGFBP01127 241 aaPredicted RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 MAPK1P28482 360 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 USP14P54578 494 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 DYNLL1P63167 89 aaKnown RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 DEFB103AP81534 67 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 DLX2Q07687 328 aaPredicted RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 COL9A2Q14055 689 aaPredicted RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 SEPT2Q15019 361 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 SPTY2D1Q68D10 685 aaPredicted RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 FBXL6Q8N531 539 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 FGD4Q96M96 766 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 GINM1Q9NU53 330 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 TRMT13Q9NUP7 481 aaKnown RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 HOXC10Q9NYD6 342 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 RAI14Q9P0K7 980 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 PA2G4Q9UQ80 394 aaKnown RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 CNPY2Q9Y2B0 182 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 DDX49Q9Y6V7 483 aaKnown RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 MYH7BA7E2Y1 1941 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 FANCMQ8IYD8 2048 aa7.54□□□□□ -1.2
CTC1-212ENST00000584439 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
CTC1-212ENST00000584439 PDS5AQ29RF7 1337 aaKnown RBP7.53□□□□□ -1.2
CTC1-212ENST00000584439 LINC01553A4QN01 128 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ABL1P00519 1130 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 LDHCP07864 332 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 FDX1P10109 184 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 SKIP12755 728 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 AVPR2P30518 371 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 SHMT1P34896 483 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ERVK-21P61565 698 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 PTK7Q13308 1070 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ZNF211Q13398 564 aaPredicted RBP7.53□□□□□ -1.2
CTC1-212ENST00000584439 ACVR2BQ13705 512 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 GPNMBQ14956 572 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 SUGP1Q8IWZ8 645 aaKnown RBP7.53□□□□□ -1.2
CTC1-212ENST00000584439 SPICE1Q8N0Z3 855 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ADSSL1Q8N142 457 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 PHOSPHO2Q8TCD6 241 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 GPATCH3Q96I76 525 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 C17orf80Q9BSJ5 609 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 KATNBL1Q9H079 304 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 ANO2Q9NQ90 1003 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 FBXO28Q9NVF7 368 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 CEP126Q9P2H0 1117 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 PRKAG3Q9UGI9 489 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 PCDHGC3Q9UN70 934 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 TNNQ9UQP3 1299 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 DIS3Q9Y2L1 958 aaKnown RBP7.53□□□□□ -1.2
CTC1-212ENST00000584439 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
CTC1-212ENST00000584439 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
CTC1-212ENST00000584439 FRYQ5TBA9 3013 aa7.52□□□□□ -1.21
CTC1-212ENST00000584439 TLDC2A0PJX2 215 aa7.52□□□□□ -1.21
CTC1-212ENST00000584439 H3BRB1 525 aa7.52□□□□□ -1.21
CTC1-212ENST00000584439 CCER2I3L3R5 266 aa7.52□□□□□ -1.21
CTC1-212ENST00000584439 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
CTC1-212ENST00000584439 FLOT1O75955 427 aa7.52□□□□□ -1.21
CTC1-212ENST00000584439 MAP4K4O95819 1239 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms