RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 GRB10Q13322 594 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
CDK12-208ENST00000584336 PRR16Q569H4 304 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 HSP90AA4PQ58FG1 418 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 NT5DC1Q5TFE4 455 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 PPP4R3AQ6IN85 833 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 ELOA2Q8IYF1 753 aaPredicted RBP11.76□□□□□ -0.53
CDK12-208ENST00000584336 TRMT44Q8IYL2 757 aaKnown RBP11.76□□□□□ -0.53
CDK12-208ENST00000584336 IGSF22Q8N9C0 903 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
CDK12-208ENST00000584336 SPC24Q8NBT2 197 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 SPATA20Q8TB22 786 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 ANP32BQ92688 251 aaKnown RBP11.76□□□□□ -0.53
CDK12-208ENST00000584336 LENG9Q96B70 501 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 CCSER1Q9C0I3 900 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 AFG3L2Q9Y4W6 797 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 LAD1O00515 517 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 SUPT20HL1Q3ZLR7 823 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 LPAR1Q92633 364 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 CDCA5Q96FF9 252 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 LRWD1Q9UFC0 647 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 PPP2R3BQ9Y5P8 575 aa11.76□□□□□ -0.53
CDK12-208ENST00000584336 SCN4AP35499 1836 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
CDK12-208ENST00000584336 ICAM1P05362 532 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 SREBF1P36956 1147 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.534e-8■■■■■ 30.8
CDK12-208ENST00000584336 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 PTPN21Q16825 1174 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
CDK12-208ENST00000584336 TREML2Q5T2D2 321 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 RBM46Q8TBY0 533 aaKnown RBP11.75□□□□□ -0.53
CDK12-208ENST00000584336 MBOAT7Q96N66 472 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 ELP3Q9H9T3 547 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
CDK12-208ENST00000584336 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 BECN2A8MW95 431 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 CYP3A7P24462 503 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 USP11P51784 963 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 STX17P56962 302 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 MCM6Q14566 821 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 IL31RAQ8NI17 732 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 KCNMB3Q9NPA1 279 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 RRAGDQ9NQL2 400 aaPredicted RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 GINM1Q9NU53 330 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 GOLGA6L19H0YKK7 550 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 VWA5AO00534 786 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 MSH4O15457 936 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
CDK12-208ENST00000584336 KLRC4O43908 158 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 MARCH6O60337 910 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 ZNF75DP51815 510 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 KANK3Q6NY19 840 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 REPS2Q8NFH8 660 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 GDAQ9Y2T3 454 aa11.74□□□□□ -0.53
CDK12-208ENST00000584336 ABCB11O95342 1321 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 RLFQ13129 1914 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 TRAF5O00463 557 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 TXLNAP40222 546 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 USP14P54578 494 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 CATSPERGQ6ZRH7 1159 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 PLA2G4DQ86XP0 818 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 TAAR1Q96RJ0 339 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 R3HDMLQ9H3Y0 253 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 PCDHA12Q9UN75 941 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 PAPPA2Q9BXP8 1791 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 PARP14Q460N5 1801 aa11.73□□□□□ -0.53
CDK12-208ENST00000584336 PPP1R3GB7ZBB8 358 aa11.72□□□□□ -0.53
CDK12-208ENST00000584336 MED24O75448 989 aa11.72□□□□□ -0.53
CDK12-208ENST00000584336 RPN1P04843 607 aaKnown RBP11.72□□□□□ -0.53
CDK12-208ENST00000584336 ARP10275 920 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms