RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTTN-209ENST00000583043 SLC16A3O15427 465 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 FXR2P51116 673 aaKnown RBP eCLIP6.45□□□□□ -1.38
RTTN-209ENST00000583043 DYNLL1P63167 89 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 TROAPQ12815 778 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 NR1I3Q14994 352 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 NAALADL2Q58DX5 795 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 INTS5Q6P9B9 1019 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 GPBP1Q86WP2 473 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 RTKN2Q8IZC4 609 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 MSL3Q8N5Y2 521 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 MIS12Q9H081 205 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 CAPN11Q9UMQ6 739 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 KIAA0391O15091 583 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 EPHB4P54760 987 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 GTF2IP78347 998 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 RBL2Q08999 1139 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 EDRF1Q3B7T1 1238 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 LIN9Q5TKA1 542 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 RASGRP2Q7LDG7 609 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 ADSSL1Q8N142 457 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 IFT74Q96LB3 600 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 RIOK1Q9BRS2 568 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 MAF1Q9H063 256 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 SAP30BPQ9UHR5 308 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 DUOX1Q9NRD9 1551 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 LMAN1P49257 510 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 DLGAP5Q15398 846 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 TRMT44Q8IYL2 757 aaKnown RBP6.45□□□□□ -1.38
RTTN-209ENST00000583043 TBCKQ8TEA7 893 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 SLF1Q9BQI6 1058 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 TBC1D7Q9P0N9 293 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 NRBP1Q9UHY1 535 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 PCDHA1Q9Y5I3 950 aa6.45□□□□□ -1.38
RTTN-209ENST00000583043 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 H2AFZP0C0S5 128 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 POLD1P28340 1107 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 KMT5BQ4FZB7 885 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 COBLL1Q53SF7 1204 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 H2AFVQ71UI9 128 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 CCDC91Q7Z6B0 441 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 MAP3K20Q9NYL2 800 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 ADGRG1Q9Y653 693 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 ADKP55263 362 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 ST3GAL1Q11201 340 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 WHAMMQ8TF30 809 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 JPH2Q9BR39 696 aaPredicted RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 BEGAINQ9BUH8 593 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 NDST4Q9H3R1 872 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 FAM114A2Q9NRY5 505 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 ADD3Q9UEY8 706 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 LRP6O75581 1613 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 CALCOCO2Q13137 446 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 WDR44Q5JSH3 913 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 RAD54LQ92698 747 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 FAM129AQ9BZQ8 928 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 ABHD10Q9NUJ1 306 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 ATP6V0A2Q9Y487 856 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 CEP83Q9Y592 693 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 RIC1Q4ADV7 1423 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 GOLGA6BA6NDN3 693 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 NPM3O75607 178 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 ZNF189O75820 626 aaPredicted RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 AFPP02771 609 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 CAPN2P17655 700 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 PSMC2P35998 433 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 DMTNQ08495 405 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 NNTQ13423 1086 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 SEPT7Q16181 437 aaKnown RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 TMEM132AQ24JP5 1023 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 GNPTABQ3T906 1256 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 SMYD5Q6GMV2 418 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 XRRA1Q6P2D8 792 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 ANKS4BQ8N8V4 417 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 GIMAP8Q8ND71 665 aaPredicted RBP6.44□□□□□ -1.38
RTTN-209ENST00000583043 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 VPS33BQ9H267 617 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 HOMER3Q9NSC5 361 aa6.44□□□□□ -1.38
RTTN-209ENST00000583043 GAS7O60861 476 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 BMP3P12645 472 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 SARSP49591 514 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 ITIH3Q06033 890 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 ADAM9Q13443 819 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 PPP2R5AQ15172 486 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 SPECC1Q5M775 1068 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 ZFYVE27Q5T4F4 411 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 CCDC50Q8IVM0 306 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 TSC1Q92574 1164 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 FTOQ9C0B1 505 aaKnown RBP eCLIP6.43□□□□□ -1.38
RTTN-209ENST00000583043 BLZF1Q9H2G9 400 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 BIN2Q9UBW5 565 aaPredicted RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 AMFRQ9UKV5 643 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 UTP11Q9Y3A2 253 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 PRLRP16471 622 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 TECP42680 631 aa6.43□□□□□ -1.38
RTTN-209ENST00000583043 NCBP1Q09161 790 aaKnown RBP6.43□□□□□ -1.38
RTTN-209ENST00000583043 CUL1Q13616 776 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms