RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 ASTN1O14525 1302 aa23.01■■□□□ 1.27
TOP3A-213ENST00000582230 K7ELQ4 463 aaPredicted RBP23■■□□□ 1.27
TOP3A-213ENST00000582230 PRKAR2AP13861 404 aaKnown RBP23■■□□□ 1.27
TOP3A-213ENST00000582230 CACNB2Q08289 660 aaPredicted RBP23■■□□□ 1.27
TOP3A-213ENST00000582230 AIFM3Q96NN9 605 aa23■■□□□ 1.27
TOP3A-213ENST00000582230 PXMP2Q9NR77 195 aa23■■□□□ 1.27
TOP3A-213ENST00000582230 CDKN2AIPQ9NXV6 580 aaPredicted RBP23■■□□□ 1.27
TOP3A-213ENST00000582230 KIF3AQ9Y496 699 aa23■■□□□ 1.27
TOP3A-213ENST00000582230 SPDYE3A6NKU9 549 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 DTNBO60941 627 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 SNAI1O95863 264 aaPredicted RBP22.99■■□□□ 1.27
TOP3A-213ENST00000582230 FOSP01100 380 aaPredicted RBP22.99■■□□□ 1.27
TOP3A-213ENST00000582230 EDNRBP24530 442 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 PDE4DQ08499 809 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 TRIM32Q13049 653 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 CUL4AQ13619 759 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 UBE2SQ16763 222 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 HSCBQ8IWL3 235 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 TNS4Q8IZW8 715 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 FAM184AQ8NB25 1140 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 ABHD16BQ9H3Z7 469 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 HMX1Q9NP08 348 aaPredicted RBP22.99■■□□□ 1.27
TOP3A-213ENST00000582230 RPTORQ8N122 1335 aa22.99■■□□□ 1.27
TOP3A-213ENST00000582230 CLK2P49760 499 aaKnown RBP22.98■■□□□ 1.27
TOP3A-213ENST00000582230 AP3B2Q13367 1082 aa22.98■■□□□ 1.27
TOP3A-213ENST00000582230 REXO1Q8N1G1 1221 aaKnown RBP22.98■■□□□ 1.27
TOP3A-213ENST00000582230 SHISA4Q96DD7 197 aa22.98■■□□□ 1.27
TOP3A-213ENST00000582230 EHMT1Q9H9B1 1298 aa22.98■■□□□ 1.27
TOP3A-213ENST00000582230 ZNFX1Q9P2E3 1918 aaKnown RBP22.98■■□□□ 1.27
TOP3A-213ENST00000582230 RBBP6Q7Z6E9 1792 aaKnown RBP22.97■■□□□ 1.27
TOP3A-213ENST00000582230 CYBAP13498 195 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 EIF2AK2P19525 551 aaKnown RBP22.97■■□□□ 1.27
TOP3A-213ENST00000582230 TRIM29Q14134 588 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 DAGLBQ8NCG7 672 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 PDCD2LQ9BRP1 358 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 PHF20Q9BVI0 1012 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 PCDHA6Q9UN73 950 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 PCDHA4Q9UN74 947 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 PCDHA8Q9Y5H6 950 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 FRMPD4Q14CM0 1322 aa22.97■■□□□ 1.27
TOP3A-213ENST00000582230 NR3C2P08235 984 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 ACVR2BQ13705 512 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 PGM5Q15124 567 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 STXBP2Q15833 593 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 XRRA1Q6P2D8 792 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 VTA1Q9NP79 307 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 SMC3Q9UQE7 1217 aa22.96■■□□□ 1.27
TOP3A-213ENST00000582230 CCL5P13501 91 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 PRAMEF19Q5SWL8 479 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 VSIG10LQ86VR7 867 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 BLIDQ8IZY5 108 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 INTS4Q96HW7 963 aaKnown RBP22.95■■□□□ 1.26
TOP3A-213ENST00000582230 ABHD8Q96I13 439 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 KCNJ14Q9UNX9 436 aa22.95■■□□□ 1.26
TOP3A-213ENST00000582230 PLXNA1Q9UIW2 1896 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 EIF3JO75822 258 aaKnown RBP22.94■■□□□ 1.26
TOP3A-213ENST00000582230 ZNF865P0CJ78 1059 aaPredicted RBP22.94■■□□□ 1.26
TOP3A-213ENST00000582230 CCND2P30279 289 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 MTFR1Q15390 333 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 TRPV1Q8NER1 839 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 C8orf76Q96K31 380 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 KATNBL1Q9H079 304 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 RNF208Q9H0X6 261 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 UNC93B1Q9H1C4 597 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 BRMS1Q9HCU9 246 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 TMEM260Q9NX78 707 aa22.94■■□□□ 1.26
TOP3A-213ENST00000582230 ZHX1Q9UKY1 873 aaPredicted RBP22.94■■□□□ 1.26
TOP3A-213ENST00000582230 SEPT4O43236 478 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 STAM2O75886 525 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 MYCLP12524 364 aaPredicted RBP22.93■■□□□ 1.26
TOP3A-213ENST00000582230 CNGA1P29973 690 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 CCND3P30281 292 aaPredicted RBP22.93■■□□□ 1.26
TOP3A-213ENST00000582230 JAKMIP3Q5VZ66 844 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 PCNX4Q63HM2 1172 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 ANO3Q9BYT9 981 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.93■■□□□ 1.26
TOP3A-213ENST00000582230 GJB4Q9NTQ9 266 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 FAM184BQ9ULE4 1060 aa22.93■■□□□ 1.26
TOP3A-213ENST00000582230 DDX49Q9Y6V7 483 aaKnown RBP22.93■■□□□ 1.26
TOP3A-213ENST00000582230 MSCO60682 206 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 MYCP01106 439 aaPredicted RBP22.92■■□□□ 1.26
TOP3A-213ENST00000582230 MMP1P03956 469 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 GJB2P29033 226 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 NPY5RQ15761 445 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 KRT40Q6A162 431 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 EEPD1Q7L9B9 569 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 TMEM106CQ9BVX2 250 aa22.92■■□□□ 1.26
TOP3A-213ENST00000582230 PAK6Q9NQU5 681 aaPredicted RBP22.92■■□□□ 1.26
TOP3A-213ENST00000582230 LCTP09848 1927 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 M0R2N6 131 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 ADAMTS3O15072 1205 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 AKR1A1P14550 325 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 SREBF1P36956 1147 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 IQSEC1Q6DN90 963 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 TAPT1Q6NXT6 567 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 FBXO16Q8IX29 292 aaPredicted RBP22.91■■□□□ 1.26
TOP3A-213ENST00000582230 FBXO18Q8NFZ0 1043 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 IL31RAQ8NI17 732 aa22.91■■□□□ 1.26
TOP3A-213ENST00000582230 GJB1P08034 283 aa22.9■■□□□ 1.26
TOP3A-213ENST00000582230 CAPN2P17655 700 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms