RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 TRIM60Q495X7 471 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 SLC30A10Q6XR72 485 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 RALYLQ86SE5 291 aaKnown RBP8.35□□□□□ -1.07
SNX11-208ENST00000581298 FBXO11Q86XK2 927 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 TEX2Q8IWB9 1127 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 FBXL16Q8N461 479 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 TBC1D5Q92609 795 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
SNX11-208ENST00000581298 LENG1Q96BZ8 264 aaPredicted RBP8.35□□□□□ -1.07
SNX11-208ENST00000581298 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
SNX11-208ENST00000581298 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 CPVLQ9H3G5 476 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 PDGFCQ9NRA1 345 aa8.35□□□□□ -1.07
SNX11-208ENST00000581298 ISY1Q9ULR0 285 aaKnown RBP8.35□□□□□ -1.07
SNX11-208ENST00000581298 MROH7Q68CQ1 1323 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 ERICH2A1L162 156 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 A6NJR5 290 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 CD4P01730 458 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 SYN1P17600 705 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 MCM5P33992 734 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 GNAQP50148 359 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 RCAN1P53805 252 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 IRX5P78411 483 aaPredicted RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 FAAP100Q0VG06 881 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 GNASQ5JWF2 1037 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 TLK2Q86UE8 772 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 FBXO16Q8IX29 292 aaPredicted RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 NSUN6Q8TEA1 469 aaKnown RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 SCFD2Q8WU76 684 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 FERMT2Q96AC1 680 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 CHMP4CQ96CF2 233 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 GLT1D1Q96MS3 346 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 MPHOSPH6Q99547 160 aaKnown RBP8.34□□□□□ -1.07
SNX11-208ENST00000581298 LZTS2Q9BRK4 669 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 STARD7Q9NQZ5 370 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 COL20A1Q9P218 1284 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 TBX21Q9UL17 535 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
SNX11-208ENST00000581298 BAZ2BQ9UIF8 2168 aaKnown RBP8.34□□□□□ -1.08
SNX11-208ENST00000581298 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 FRMPD4Q14CM0 1322 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 PTPDC1A2A3K4 754 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 DYNC1LI2O43237 492 aaPredicted RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 PRC1O43663 620 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 ZEB2O60315 1214 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 KPNA6O60684 536 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 CDC45O75419 566 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 CLTBP09497 229 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 C6orf222P0C671 652 aaPredicted RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 HOXD8P13378 290 aaPredicted RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 ITGB8P26012 769 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 CALML3P27482 149 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 FSCN1Q16658 493 aaKnown RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 TMEM67Q5HYA8 995 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 TMEM63BQ5T3F8 832 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 FAM126BQ8IXS8 530 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 ZNF654Q8IZM8 581 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 TAAR1Q96RJ0 339 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 PDCD2LQ9BRP1 358 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 WDR11Q9BZH6 1224 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 AP5M1Q9H0R1 490 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 ATP11BQ9Y2G3 1177 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 PCDHA1Q9Y5I3 950 aa8.33□□□□□ -1.08
SNX11-208ENST00000581298 DDX49Q9Y6V7 483 aaKnown RBP8.33□□□□□ -1.08
SNX11-208ENST00000581298 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 TMEM265A0A087WTH1 108 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 DCDC2CA8MYV0 355 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 RGS20O76081 388 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 NR3C2P08235 984 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 CALM1P0DP23 149 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 CALM2P0DP24 149 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 CALM3P0DP25 149 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 KIF5BP33176 963 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 PDE4DQ08499 809 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 TTLL4Q14679 1199 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 STXBP2Q15833 593 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 USH1GQ495M9 461 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 RNF20Q5VTR2 975 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 FAM109BQ6ICB4 259 aaPredicted RBP8.32□□□□□ -1.08
SNX11-208ENST00000581298 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
SNX11-208ENST00000581298 CHST3Q7LGC8 479 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 SKAP1Q86WV1 359 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 RASEFQ8IZ41 740 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 PIGSQ96S52 555 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 RMDN3Q96TC7 470 aa8.32□□□□□ -1.08
SNX11-208ENST00000581298 AGXT2Q9BYV1 514 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms