RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 GNA11P29992 359 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 ZMYND12Q9H0C1 365 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 COL20A1Q9P218 1284 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 CENPFP49454 3210 aa17.79■□□□□ 0.44
SS18-216ENST00000580751 ASTN1O14525 1302 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 PRKAR2AP13861 404 aaKnown RBP17.78■□□□□ 0.44
SS18-216ENST00000580751 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
SS18-216ENST00000580751 CYP2C19P33261 490 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 PURBQ96QR8 312 aaKnown RBP17.78■□□□□ 0.44
SS18-216ENST00000580751 ALG1Q9BT22 464 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 NRBP1Q9UHY1 535 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 CNPY2Q9Y2B0 182 aa17.78■□□□□ 0.44
SS18-216ENST00000580751 SPDYE3A6NKU9 549 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 GJB2P29033 226 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 NLRP5P59047 1200 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 AP3B2Q13367 1082 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 MAP3K21Q5TCX8 1036 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 ARHGEF16Q5VV41 709 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 MCTP2Q6DN12 878 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 GALNT17Q6IS24 598 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 REXO1Q8N1G1 1221 aaKnown RBP17.77■□□□□ 0.44
SS18-216ENST00000580751 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 MORC4Q8TE76 937 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 ZNF333Q96JL9 665 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 AIFM3Q96NN9 605 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 IWS1Q96ST2 819 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
SS18-216ENST00000580751 FOSP01100 380 aaPredicted RBP17.76■□□□□ 0.43
SS18-216ENST00000580751 EDNRBP24530 442 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 CACNB2Q08289 660 aaPredicted RBP17.76■□□□□ 0.43
SS18-216ENST00000580751 PDE4DQ08499 809 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 TRIM29Q14134 588 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 UBE2SQ16763 222 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 TNS4Q8IZW8 715 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
SS18-216ENST00000580751 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.76■□□□□ 0.43
SS18-216ENST00000580751 FRMPD4Q14CM0 1322 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 DTNBO60941 627 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 CYBAP13498 195 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 EIF2AK2P19525 551 aaKnown RBP17.75■□□□□ 0.43
SS18-216ENST00000580751 TRIM32Q13049 653 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 DAGLBQ8NCG7 672 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 PCDHA4Q9UN74 947 aa17.75■□□□□ 0.43
SS18-216ENST00000580751 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
SS18-216ENST00000580751 MCM3APO60318 1980 aa17.74■□□□□ 0.43
SS18-216ENST00000580751 SNAI1O95863 264 aaPredicted RBP17.74■□□□□ 0.43
SS18-216ENST00000580751 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
SS18-216ENST00000580751 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
SS18-216ENST00000580751 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
SS18-216ENST00000580751 VTA1Q9NP79 307 aa17.74■□□□□ 0.43
SS18-216ENST00000580751 LRRC37A2A6NM11 1700 aa17.74■□□□□ 0.43
SS18-216ENST00000580751 NR3C2P08235 984 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 CCND2P30279 289 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 ACVR2BQ13705 512 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 PGM5Q15124 567 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 STXBP2Q15833 593 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
SS18-216ENST00000580751 XRRA1Q6P2D8 792 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 C8orf76Q96K31 380 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 ANO3Q9BYT9 981 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 ZHX1Q9UKY1 873 aaPredicted RBP17.73■□□□□ 0.43
SS18-216ENST00000580751 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 KCNJ14Q9UNX9 436 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
SS18-216ENST00000580751 STX6O43752 255 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 MSCO60682 206 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 CCL5P13501 91 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 SYT1P21579 422 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 KATNBL1Q9H079 304 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.72■□□□□ 0.43
SS18-216ENST00000580751 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 UNC93B1Q9H1C4 597 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 TMEM260Q9NX78 707 aa17.72■□□□□ 0.43
SS18-216ENST00000580751 SEPT4O43236 478 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 EIF3JO75822 258 aaKnown RBP17.71■□□□□ 0.43
SS18-216ENST00000580751 STAM2O75886 525 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 BRD1O95696 1058 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 MYCP01106 439 aaPredicted RBP17.71■□□□□ 0.43
SS18-216ENST00000580751 ZNF865P0CJ78 1059 aaPredicted RBP17.71■□□□□ 0.43
SS18-216ENST00000580751 AKR1A1P14550 325 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 CNGA1P29973 690 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 CCND3P30281 292 aaPredicted RBP17.71■□□□□ 0.43
SS18-216ENST00000580751 MTFR1Q15390 333 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 NPY5RQ15761 445 aa17.71■□□□□ 0.43
SS18-216ENST00000580751 PRAMEF19Q5SWL8 479 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms