RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 FBXL18Q96ME1 805 aa22.83■■□□□ 1.25
LIMD2-209ENST00000580222 TRIOO75962 3097 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 RBM47A0AV96 593 aaKnown RBP22.82■■□□□ 1.24
LIMD2-209ENST00000580222 SDSP20132 328 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 KCTD1Q719H9 257 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 COPS5Q92905 334 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 SYNPO2Q9UMS6 1093 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 TET1Q8NFU7 2136 aa22.82■■□□□ 1.24
LIMD2-209ENST00000580222 COL4A4P53420 1690 aaPredicted RBP22.81■■□□□ 1.24
LIMD2-209ENST00000580222 ZFYP08048 801 aaPredicted RBP22.81■■□□□ 1.24
LIMD2-209ENST00000580222 SSTR3P32745 418 aaPredicted RBP22.81■■□□□ 1.24
LIMD2-209ENST00000580222 BAATQ14032 418 aaPredicted RBP22.81■■□□□ 1.24
LIMD2-209ENST00000580222 GIMAP6Q6P9H5 292 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 FAM160B2Q86V87 743 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 OR6J1Q8NGC5 347 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 NEDD1Q8NHV4 660 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 CHURC1Q8WUH1 139 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 GMCL1Q96IK5 515 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 SNX27Q96L92 541 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 PRR12Q9ULL5 1215 aa22.81■■□□□ 1.24
LIMD2-209ENST00000580222 RNF113AO15541 343 aaKnown RBP22.8■■□□□ 1.24
LIMD2-209ENST00000580222 BAIAP3O94812 1187 aa22.8■■□□□ 1.24
LIMD2-209ENST00000580222 CPT1AP50416 773 aa22.8■■□□□ 1.24
LIMD2-209ENST00000580222 ERVK-21P61565 698 aa22.8■■□□□ 1.24
LIMD2-209ENST00000580222 IKQ13123 557 aaPredicted RBP22.8■■□□□ 1.24
LIMD2-209ENST00000580222 BMP2KLQ5H9B9 411 aa22.8■■□□□ 1.24
LIMD2-209ENST00000580222 NFRKBQ6P4R8 1299 aa22.8■■□□□ 1.24
LIMD2-209ENST00000580222 LINC01553A4QN01 128 aa22.79■■□□□ 1.24
LIMD2-209ENST00000580222 SLC1A4P43007 532 aa22.79■■□□□ 1.24
LIMD2-209ENST00000580222 KCNJ6P48051 423 aa22.79■■□□□ 1.24
LIMD2-209ENST00000580222 ALDH5A1P51649 535 aaPredicted RBP22.79■■□□□ 1.24
LIMD2-209ENST00000580222 PTCRAQ6ISU1 281 aaPredicted RBP22.79■■□□□ 1.24
LIMD2-209ENST00000580222 DHX38Q92620 1227 aaKnown RBP22.79■■□□□ 1.24
LIMD2-209ENST00000580222 ZBED2Q9BTP6 218 aa22.79■■□□□ 1.24
LIMD2-209ENST00000580222 GPHNQ9NQX3 736 aaPredicted RBP22.79■■□□□ 1.24
LIMD2-209ENST00000580222 POTEB3A0JP26 581 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 GRXCR2A6NFK2 248 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 TFAP4Q01664 338 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 BFSP2Q13515 415 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 POTEBQ6S5H4 581 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 CCPG1Q9ULG6 757 aa22.78■■□□□ 1.24
LIMD2-209ENST00000580222 PTPRSQ13332 1948 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 A6NJR5 290 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 NFIBO00712 420 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 PLA2G6O60733 806 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 CHMP4BP1P59074 171 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 RCSD1Q6JBY9 416 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 APPBP2Q92624 585 aa22.77■■□□□ 1.24
LIMD2-209ENST00000580222 TGS1Q96RS0 853 aaKnown RBP22.77■■□□□ 1.24
LIMD2-209ENST00000580222 LCTP09848 1927 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 PLIN4Q96Q06 1357 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 H3BQ06 376 aaPredicted RBP22.76■■□□□ 1.23
LIMD2-209ENST00000580222 M0R2C6 588 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 HIP1O00291 1037 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 NBNO60934 754 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 GJB5O95377 273 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 TSPY3P0CV98 308 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 TSPY8P0CW00 308 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 ALADP13716 330 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 GDF6Q6KF10 455 aaPredicted RBP22.76■■□□□ 1.23
LIMD2-209ENST00000580222 FAM117BQ6P1L5 589 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 PHOX2BQ99453 314 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 RAD9AQ99638 391 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 INCENPQ9NQS7 918 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 DIAPH3Q9NSV4 1193 aa22.76■■□□□ 1.23
LIMD2-209ENST00000580222 GPAA1O43292 621 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 NMT2O60551 498 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 TDO2P48775 406 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 PTPN11Q06124 597 aaPredicted RBP22.75■■□□□ 1.23
LIMD2-209ENST00000580222 PTGISQ16647 500 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 TTBK2Q6IQ55 1244 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 SLC30A10Q6XR72 485 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 TICAM2Q86XR7 235 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 NEK9Q8TD19 979 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 C17orf80Q9BSJ5 609 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 SCN10AQ9Y5Y9 1956 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 USP34Q70CQ2 3546 aa22.75■■□□□ 1.23
LIMD2-209ENST00000580222 MYH4Q9Y623 1939 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 DCXO43602 365 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 ARIH2O95376 493 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 ICAM1P05362 532 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 CSPP1Q1MSJ5 1256 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 ZMYM1Q5SVZ6 1142 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 IFNL3Q8IZI9 196 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 IL17RBQ9NRM6 502 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 NOD1Q9Y239 953 aa22.74■■□□□ 1.23
LIMD2-209ENST00000580222 CXCL10P02778 98 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 APPP05067 770 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 SLC16A2P36021 539 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 NMIQ13287 307 aaPredicted RBP22.73■■□□□ 1.23
LIMD2-209ENST00000580222 CNKSR3Q6P9H4 555 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 AFAP1L1Q8TED9 768 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 CLEC4DQ8WXI8 215 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 MTMR7Q9Y216 660 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 C5orf42Q9H799 3197 aa22.73■■□□□ 1.23
LIMD2-209ENST00000580222 SELPP16109 830 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 PPP2R5BQ15173 497 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 TRAF7Q6Q0C0 670 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 HFE2Q6ZVN8 426 aa22.72■■□□□ 1.23
LIMD2-209ENST00000580222 LRRC8DQ7L1W4 858 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms