RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ARHGAP4P98171 946 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 SHCBP1Q8NEM2 672 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 CRYGNQ8WXF5 182 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 EHMT1Q9H9B1 1298 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 LMBRD1Q9NUN5 540 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
TSEN54-206ENST00000579449 ELP1O95163 1332 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 CCNT1O60563 726 aaKnown RBP15.78■□□□□ 0.12
TSEN54-206ENST00000579449 BMP15O95972 392 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 USP11P51784 963 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 HTRA3P83110 453 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 FAM110CQ1W6H9 321 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSEN54-206ENST00000579449 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 KCNG4Q8TDN1 519 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 TAAR1Q96RJ0 339 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 PORCNQ9H237 461 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 MROH8Q9H579 483 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 CPA4Q9UI42 421 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 PLXNB2O15031 1838 aa15.78■□□□□ 0.12
TSEN54-206ENST00000579449 PFASO15067 1338 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 RPTORQ8N122 1335 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 TDP2O95551 362 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 CYP3A4P08684 503 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
TSEN54-206ENST00000579449 UBXN2AP68543 259 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 PTGDRQ13258 359 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 WDR78Q5VTH9 848 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 PURBQ96QR8 312 aaKnown RBP15.77■□□□□ 0.12
TSEN54-206ENST00000579449 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
TSEN54-206ENST00000579449 FRMPD4Q14CM0 1322 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 TLR2O60603 784 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 PPP6R2O75170 966 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 GADD45BO75293 160 aaPredicted RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 BCRP11274 1271 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 GCFC2P16383 781 aaKnown RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 ME1P48163 572 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 VEGFBP49765 207 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 CRHR2Q13324 411 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 ORC2Q13416 577 aaPredicted RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 PPP4R3AQ6IN85 833 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 C17orf99Q6UX52 265 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 REM2Q8IYK8 340 aaPredicted RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 C4orf32Q8N8J7 132 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 RMDN3Q96TC7 470 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 MMP19Q99542 508 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 NAP1L4Q99733 375 aaKnown RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 TMEM60Q9H2L4 133 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 PCDHA7Q9UN72 937 aa15.76■□□□□ 0.11
TSEN54-206ENST00000579449 MORC2Q9Y6X9 1032 aaPredicted RBP15.76■□□□□ 0.11
TSEN54-206ENST00000579449 CYP3A7-CYP3A51PA0A087WV96 503 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 CA12O43570 354 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 SLC37A4O43826 429 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 NEMFO60524 1076 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 ALDH1A1P00352 501 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 EIF2AK2P19525 551 aaKnown RBP15.75■□□□□ 0.11
TSEN54-206ENST00000579449 PTMSP20962 102 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 CYP3A7P24462 503 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 CIITAP33076 1130 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 ARHGEF16Q5VV41 709 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 CCAR1Q8IX12 1150 aaKnown RBP15.75■□□□□ 0.11
TSEN54-206ENST00000579449 JMYQ8N9B5 988 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
TSEN54-206ENST00000579449 DDX25Q9UHL0 483 aaKnown RBP15.75■□□□□ 0.11
TSEN54-206ENST00000579449 DOCK3Q8IZD9 2030 aa15.75■□□□□ 0.11
TSEN54-206ENST00000579449 PLXNA1Q9UIW2 1896 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 POTEB2H3BUK9 544 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 FCER1AP12319 257 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 PTPREP23469 700 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 ZNF76P36508 570 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 UBE2HP62256 183 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 PGM5Q15124 567 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 MBOAT7Q96N66 472 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
TSEN54-206ENST00000579449 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
TSEN54-206ENST00000579449 GOLGA6L4A6NEF3 574 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 FAM86B1E9PN63 330 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 CUTAO60888 179 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 FAM86B2P0C5J1 330 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 MAPK4P31152 587 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 MAP2K2P36507 400 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 KCTD2Q14681 263 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 CALCRLQ16602 461 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 Q4G0T1 1027 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
TSEN54-206ENST00000579449 PCNX4Q63HM2 1172 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 FAM133AQ8N9E0 248 aa15.73■□□□□ 0.11
TSEN54-206ENST00000579449 KRI1Q8N9T8 703 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms