RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 UPF3AQ9H1J1 476 aaKnown RBP27.65■■■□□ 2.02
LIMD2-207ENST00000579329 CYP46A1Q9Y6A2 500 aa27.65■■■□□ 2.02
LIMD2-207ENST00000579329 GJA9P57773 515 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 PPP2R5BQ15173 497 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 ARHGEF16Q5VV41 709 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 KLHDC9Q8NEP7 349 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 IWS1Q96ST2 819 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 PHF24Q9UPV7 400 aa27.64■■■□□ 2.02
LIMD2-207ENST00000579329 CNTNAP5Q8WYK1 1306 aa27.64■■■□□ 2.01
LIMD2-207ENST00000579329 C6orf222P0C671 652 aaPredicted RBP27.63■■■□□ 2.01
LIMD2-207ENST00000579329 SMPD1P17405 629 aa27.63■■■□□ 2.01
LIMD2-207ENST00000579329 CST5P28325 142 aaPredicted RBP27.63■■■□□ 2.01
LIMD2-207ENST00000579329 METAP2P50579 478 aaKnown RBP eCLIP27.63■■■□□ 2.01
LIMD2-207ENST00000579329 TSEN34Q9BSV6 310 aaKnown RBP27.63■■■□□ 2.01
LIMD2-207ENST00000579329 PXMP2Q9NR77 195 aa27.63■■■□□ 2.01
LIMD2-207ENST00000579329 GNEQ9Y223 722 aaKnown RBP27.63■■■□□ 2.01
LIMD2-207ENST00000579329 RBM47A0AV96 593 aaKnown RBP27.62■■■□□ 2.01
LIMD2-207ENST00000579329 HOXA13P31271 388 aaPredicted RBP27.62■■■□□ 2.01
LIMD2-207ENST00000579329 LRRC26Q2I0M4 334 aa27.62■■■□□ 2.01
LIMD2-207ENST00000579329 TLK2Q86UE8 772 aa27.62■■■□□ 2.01
LIMD2-207ENST00000579329 C7orf61Q8IZ16 206 aa27.62■■■□□ 2.01
LIMD2-207ENST00000579329 NID2Q14112 1375 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 COL6A3P12111 3177 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 CCDC196A0A1B0GTZ2 297 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 MYADML2A6NDP7 307 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 EIF2AK2P19525 551 aaKnown RBP27.61■■■□□ 2.01
LIMD2-207ENST00000579329 ATN1P54259 1190 aaPredicted RBP27.61■■■□□ 2.01
LIMD2-207ENST00000579329 NKX3-2P78367 333 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 AP5M1Q9H0R1 490 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 FAM217BQ9NTX9 383 aaPredicted RBP27.61■■■□□ 2.01
LIMD2-207ENST00000579329 Q9Y3F1 56 aa27.61■■■□□ 2.01
LIMD2-207ENST00000579329 hCG_1642624A0A1W2PR95 340 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 MOXD2PA6NHM9 499 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 SOX1O00570 391 aaPredicted RBP27.6■■■□□ 2.01
LIMD2-207ENST00000579329 CDC27P30260 824 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 ANAPC15P60006 121 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 FUT2Q10981 343 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 STXBP2Q15833 593 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 DUSP28Q4G0W2 176 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 PCSK9Q8NBP7 692 aaKnown RBP27.6■■■□□ 2.01
LIMD2-207ENST00000579329 SCFD2Q8WU76 684 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 FERMT2Q96AC1 680 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 WDR11Q9BZH6 1224 aa27.6■■■□□ 2.01
LIMD2-207ENST00000579329 UPF3BQ9BZI7 483 aaKnown RBP27.6■■■□□ 2.01
LIMD2-207ENST00000579329 A0A1W2PPC1 479 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 NR3C2P08235 984 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 KCNA10Q16322 511 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 CCSAPQ6IQ19 270 aaPredicted RBP27.59■■■□□ 2.01
LIMD2-207ENST00000579329 SLC39A5Q6ZMH5 540 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 CUL5Q93034 780 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 PDCD2LQ9BRP1 358 aa27.59■■■□□ 2.01
LIMD2-207ENST00000579329 A0A1W2PQ45 241 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-207ENST00000579329 A0A1W2PQY0 241 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 DYNC1LI2O43237 492 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-207ENST00000579329 ACLYP53396 1101 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 EVCP57679 992 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 IRX5P78411 483 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-207ENST00000579329 GNASQ5JWF2 1037 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 HEATR3Q7Z4Q2 680 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 FCHSD1Q86WN1 690 aa27.58■■■□□ 2.01
LIMD2-207ENST00000579329 NKRFO15226 690 aaKnown RBP eCLIP27.57■■■□□ 2
LIMD2-207ENST00000579329 CTAGE5O15320 804 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 RTP1P59025 263 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 TOB2Q14106 344 aaPredicted RBP27.57■■■□□ 2
LIMD2-207ENST00000579329 TTLL4Q14679 1199 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 TMEM63BQ5T3F8 832 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 SLC17A8Q8NDX2 589 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 SMARCC2Q8TAQ2 1214 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 LRCH3Q96II8 777 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 PDRG1Q9NUG6 133 aa27.57■■■□□ 2
LIMD2-207ENST00000579329 PIK3CDO00329 1044 aa27.56■■■□□ 2
LIMD2-207ENST00000579329 ADD1P35611 737 aaKnown RBP27.56■■■□□ 2
LIMD2-207ENST00000579329 SNX17Q15036 470 aa27.56■■■□□ 2
LIMD2-207ENST00000579329 PGM5Q15124 567 aa27.56■■■□□ 2
LIMD2-207ENST00000579329 GPKOWQ92917 476 aaPredicted RBP eCLIP27.56■■■□□ 2
LIMD2-207ENST00000579329 V9GY48 417 aaPredicted RBP27.56■■■□□ 2
LIMD2-207ENST00000579329 hCG_1984214I3L0E3 225 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 ZEB2O60315 1214 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 EIF3JO75822 258 aaKnown RBP27.55■■■□□ 2
LIMD2-207ENST00000579329 ASGR1P07306 291 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 PTGS1P23219 599 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 PDIA3P30101 505 aaKnown RBP27.55■■■□□ 2
LIMD2-207ENST00000579329 BEX3Q00994 111 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 FSCN1Q16658 493 aaKnown RBP27.55■■■□□ 2
LIMD2-207ENST00000579329 C1orf53Q5VUE5 145 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 SEPT14Q6ZU15 432 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 ZNF713Q8N859 430 aaPredicted RBP27.55■■■□□ 2
LIMD2-207ENST00000579329 PSTPIP2Q9H939 334 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 STARD7Q9NQZ5 370 aa27.55■■■□□ 2
LIMD2-207ENST00000579329 TXNP10599 105 aaKnown RBP27.54■■■□□ 2
LIMD2-207ENST00000579329 MYCLP12524 364 aaPredicted RBP27.54■■■□□ 2
LIMD2-207ENST00000579329 CCND2P30279 289 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 FRMPD4Q14CM0 1322 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 WWC2Q6AWC2 1192 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 PPP1R18Q6NYC8 613 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 USP17L6PQ6QN14 398 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 GLT1D1Q96MS3 346 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 ATP11BQ9Y2G3 1177 aa27.54■■■□□ 2
LIMD2-207ENST00000579329 DLL1O00548 723 aa27.53■■■□□ 2
LIMD2-207ENST00000579329 MEIS2O14770 477 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms