RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SMC3Q9UQE7 1217 aa17.85■□□□□ 0.45
SLC6A4-205ENST00000579221 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 SPDYE3A6NKU9 549 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 INHAP05111 366 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 CACNB2Q08289 660 aaPredicted RBP17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PDE4DQ08499 809 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 ARMCX2Q7L311 632 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PHF20Q9BVI0 1012 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PXMP2Q9NR77 195 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PCDHA6Q9UN73 950 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PCDHA4Q9UN74 947 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 PCDHA8Q9Y5H6 950 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 MYH6P13533 1939 aa17.84■□□□□ 0.45
SLC6A4-205ENST00000579221 DOCK3Q8IZD9 2030 aa17.83■□□□□ 0.45
SLC6A4-205ENST00000579221 ASTN1O14525 1302 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 EIF2AK2P19525 551 aaKnown RBP17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 CLK2P49760 499 aaKnown RBP17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 TRIM32Q13049 653 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 AP3B2Q13367 1082 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 BLIDQ8IZY5 108 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 ARMC5Q96C12 935 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 KCNJ14Q9UNX9 436 aa17.83■□□□□ 0.44
SLC6A4-205ENST00000579221 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 RPTORQ8N122 1335 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 NR3C2P08235 984 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 PRKAR2AP13861 404 aaKnown RBP17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 GJB2P29033 226 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 STXBP2Q15833 593 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 PRAMEF19Q5SWL8 479 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 SHISA4Q96DD7 197 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 C8orf76Q96K31 380 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 PDCD2LQ9BRP1 358 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 ABHD16BQ9H3Z7 469 aa17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 HMX1Q9NP08 348 aaPredicted RBP17.82■□□□□ 0.44
SLC6A4-205ENST00000579221 MYCLP12524 364 aaPredicted RBP17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 EDNRBP24530 442 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 CCND2P30279 289 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 ACVR2BQ13705 512 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 PGM5Q15124 567 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 MAP3K21Q5TCX8 1036 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 KRT40Q6A162 431 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 BRMS1Q9HCU9 246 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 TMEM260Q9NX78 707 aa17.81■□□□□ 0.44
SLC6A4-205ENST00000579221 EIF3JO75822 258 aaKnown RBP17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 CNGA1P29973 690 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 FOSBP53539 338 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 SAFBQ15424 915 aaKnown RBP eCLIP17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 XRRA1Q6P2D8 792 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 VSIG10LQ86VR7 867 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 VTA1Q9NP79 307 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
SLC6A4-205ENST00000579221 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 STAM2O75886 525 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 MMP1P03956 469 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 ZNF865P0CJ78 1059 aaPredicted RBP17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 CYBAP13498 195 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 CCL5P13501 91 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 KRT2P35908 639 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 BECN1Q14457 450 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 EEPD1Q7L9B9 569 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 PIAS4Q8N2W9 510 aaPredicted RBP17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 ANO3Q9BYT9 981 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 RNF208Q9H0X6 261 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 FAM184BQ9ULE4 1060 aa17.79■□□□□ 0.44
SLC6A4-205ENST00000579221 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 MYCP01106 439 aaPredicted RBP17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 CCND3P30281 292 aaPredicted RBP17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 MTFR1Q15390 333 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 NPY5RQ15761 445 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 PCNX4Q63HM2 1172 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 IQSEC1Q6DN90 963 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 RASGRP4Q8TDF6 673 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 UNC93B1Q9H1C4 597 aa17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
SLC6A4-205ENST00000579221 M0R2N6 131 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 SEPT4O43236 478 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 GUCY1B3Q02153 619 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 KRT25Q7Z3Z0 450 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 FBXO16Q8IX29 292 aaPredicted RBP17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 KATNBL1Q9H079 304 aa17.77■□□□□ 0.44
SLC6A4-205ENST00000579221 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms