RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 DAGLBQ8NCG7 672 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 DDX12PQ92771 950 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 CUL5Q93034 780 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
TRAPPC8-204ENST00000578252 PLXNB2O15031 1838 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 ZNF236Q9UL36 1845 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 SMCO2A6NFE2 343 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 MMP1P03956 469 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 MAPK4P31152 587 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 GHRHRQ02643 423 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 KRT40Q6A162 431 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 PSTPIP2Q9H939 334 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 RIC8AQ9NPQ8 531 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 SMCHD1A6NHR9 2005 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 PFASO15067 1338 aa12.84□□□□□ -0.35
TRAPPC8-204ENST00000578252 MGAMO43451 1857 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 STX6O43752 255 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 DTNBO60941 627 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 TRPA1O75762 1119 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 ERCC3P19447 782 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 SYT1P21579 422 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 KRT2P35908 639 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 Q3C1V9 767 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 EPAS1Q99814 870 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 PCDHA4Q9UN74 947 aa12.83□□□□□ -0.36
TRAPPC8-204ENST00000578252 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 STRNO43815 780 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 TBC1D8O95759 1140 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 CFBP00751 764 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 FOSP01100 380 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 POLR2MP0CAP2 368 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 HSD17B4P51659 736 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 AP3B2Q13367 1082 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 KCTD2Q14681 263 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 REXO1Q8N1G1 1221 aaKnown RBP12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 KCNJ14Q9UNX9 436 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 IVNS1ABPQ9Y6Y0 642 aa12.82□□□□□ -0.36
TRAPPC8-204ENST00000578252 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 NFIBO00712 420 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 OPLAHO14841 1288 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 FCER1AP12319 257 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 NUCB2P80303 420 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 KIF22Q14807 665 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 PLEKHH3Q7Z736 793 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 MMP19Q99542 508 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 PORCNQ9H237 461 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
TRAPPC8-204ENST00000578252 SLC15A5A6NIM6 579 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 SPDYE3A6NKU9 549 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 PPP1R3GB7ZBB8 358 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 MEIS2O14770 477 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 PEX10O60683 326 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 DDIT3P35638 169 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 FCGRTP55899 365 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 SP3Q02447 781 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 NPY5RQ15761 445 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 KRT25Q7Z3Z0 450 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 GPR142Q7Z601 462 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 EFCC1Q9HA90 598 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 GJB4Q9NTQ9 266 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 SLC5A4Q9NY91 659 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 CYP39A1Q9NYL5 469 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
TRAPPC8-204ENST00000578252 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 B4DLN1 442 aa12.79□□□□□ -0.36
TRAPPC8-204ENST00000578252 M0R2N6 131 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms