RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NSUN6Q8TEA1 469 aaKnown RBP16.04■□□□□ 0.16
RPAIN-217ENST00000575711 TINF2Q9BSI4 451 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
RPAIN-217ENST00000575711 ASTN1O14525 1302 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 SYNGAP1Q96PV0 1343 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 UBXN2AP68543 259 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 MCTP2Q6DN12 878 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 MAMDC4Q6UXC1 1216 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 PHF20Q9BVI0 1012 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 EHMT1Q9H9B1 1298 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 PXMP2Q9NR77 195 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 PCDHA4Q9UN74 947 aa16.03■□□□□ 0.16
RPAIN-217ENST00000575711 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 INHAP05111 366 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 EIF2AK2P19525 551 aaKnown RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 GJB2P29033 226 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 CYP2C19P33261 490 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 FOSBP53539 338 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 PDE4DQ08499 809 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 REXO1Q8N1G1 1221 aaKnown RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 C8orf76Q96K31 380 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 IWS1Q96ST2 819 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 GJB4Q9NTQ9 266 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-217ENST00000575711 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 KCNJ14Q9UNX9 436 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.16
RPAIN-217ENST00000575711 IGHA2P01877 340 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 HSP90AA1P07900 732 aaKnown RBP16.01■□□□□ 0.15
RPAIN-217ENST00000575711 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
RPAIN-217ENST00000575711 BECN1Q14457 450 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 MORC4Q8TE76 937 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 PDCD2LQ9BRP1 358 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 TMEM260Q9NX78 707 aa16.01■□□□□ 0.15
RPAIN-217ENST00000575711 ZNFX1Q9P2E3 1918 aaKnown RBP16.01■□□□□ 0.15
RPAIN-217ENST00000575711 FRMPD4Q14CM0 1322 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 PLXNA1Q9UIW2 1896 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 SNAI1O95863 264 aaPredicted RBP16■□□□□ 0.15
RPAIN-217ENST00000575711 NR3C2P08235 984 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 EDNRBP24530 442 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 CACNB2Q08289 660 aaPredicted RBP16■□□□□ 0.15
RPAIN-217ENST00000575711 TRIM32Q13049 653 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 PGM5Q15124 567 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 KRT40Q6A162 431 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 ARMC5Q96C12 935 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 PGBD1Q96JS3 809 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 ANO3Q9BYT9 981 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 ABHD16BQ9H3Z7 469 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
RPAIN-217ENST00000575711 RPTORQ8N122 1335 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 MMP1P03956 469 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 MYCLP12524 364 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-217ENST00000575711 CCND2P30279 289 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 KRT2P35908 639 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 GUCY1B3Q02153 619 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
RPAIN-217ENST00000575711 NPY5RQ15761 445 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 STXBP2Q15833 593 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 MAP3K21Q5TCX8 1036 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 RASGRP4Q8TDF6 673 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 ZNF333Q96JL9 665 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 HMX1Q9NP08 348 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-217ENST00000575711 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 ZHX1Q9UKY1 873 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-217ENST00000575711 DDX49Q9Y6V7 483 aaKnown RBP15.99■□□□□ 0.15
RPAIN-217ENST00000575711 LCTP09848 1927 aa15.99■□□□□ 0.15
RPAIN-217ENST00000575711 ADAMTS3O15072 1205 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 CYBAP13498 195 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 ACVR2BQ13705 512 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 PRAMEF19Q5SWL8 479 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 XRRA1Q6P2D8 792 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 EEPD1Q7L9B9 569 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 FBXO16Q8IX29 292 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-217ENST00000575711 FBXO18Q8NFZ0 1043 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 IL31RAQ8NI17 732 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 VTA1Q9NP79 307 aa15.98■□□□□ 0.15
RPAIN-217ENST00000575711 H3BQV1 296 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 M0R2N6 131 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
RPAIN-217ENST00000575711 STAM2O75886 525 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 MYCP01106 439 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-217ENST00000575711 CNGA1P29973 690 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 SREBF1P36956 1147 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 PCNX4Q63HM2 1172 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 KRT25Q7Z3Z0 450 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 VSIG10LQ86VR7 867 aa15.97■□□□□ 0.15
RPAIN-217ENST00000575711 DIS3L2Q8IYB7 885 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms