RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 NEK8Q86SG6 692 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 EIF4A3P38919 411 aaKnown RBP21.21■□□□□ 0.99
SCARF1-206ENST00000573852 PDE4CQ08493 712 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 POTEDQ86YR6 584 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 MMGT1Q8N4V1 131 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 AENQ8WTP8 325 aaKnown RBP21.21■□□□□ 0.99
SCARF1-206ENST00000573852 LZTS2Q9BRK4 669 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 SPZ1Q9BXG8 430 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 NDST4Q9H3R1 872 aa21.21■□□□□ 0.99
SCARF1-206ENST00000573852 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
SCARF1-206ENST00000573852 TACC1O75410 805 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 KIF11P52732 1056 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 IQCEQ6IPM2 695 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 TBCKQ8TEA7 893 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 LRRC1Q9BTT6 524 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 DMGDHQ9UI17 866 aaKnown RBP21.2■□□□□ 0.98
SCARF1-206ENST00000573852 MYMKA6NI61 221 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 NT5C2P49902 561 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 MRPS25P82663 173 aaKnown RBP21.2■□□□□ 0.98
SCARF1-206ENST00000573852 GRB10Q13322 594 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
SCARF1-206ENST00000573852 C6orf50Q9HD87 102 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 BLOC1S4Q9NUP1 217 aa21.2■□□□□ 0.98
SCARF1-206ENST00000573852 TXKP42681 527 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 USP17L2Q6R6M4 530 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 MAPKAPK5Q8IW41 473 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 CALML4Q96GE6 196 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 MMRN2Q9H8L6 949 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 VAT1LQ9HCJ6 419 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 FAM184BQ9ULE4 1060 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 SV2BQ7L1I2 683 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 ZNF572Q7Z3I7 529 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-206ENST00000573852 SMARCAL1Q9NZC9 954 aa21.19■□□□□ 0.98
SCARF1-206ENST00000573852 BIN2Q9UBW5 565 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-206ENST00000573852 SRP68Q9UHB9 627 aaKnown RBP21.19■□□□□ 0.98
SCARF1-206ENST00000573852 LCA5LO95447 670 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 NBPF5PQ86XG9 351 aaPredicted RBP21.18■□□□□ 0.98
SCARF1-206ENST00000573852 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 SPATA4Q8NEY3 305 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 IQCDQ96DY2 449 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 TMEM260Q9NX78 707 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 ERCC3P19447 782 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 GNA11P29992 359 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 TM4SF1P30408 202 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 CXCR5P32302 372 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 DYMQ7RTS9 669 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 OSBPL9Q96SU4 736 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 PSMB7Q99436 277 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 EHD2Q9NZN4 543 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 SALL4Q9UJQ4 1053 aa21.18■□□□□ 0.98
SCARF1-206ENST00000573852 GOLGA6BA6NDN3 693 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 LRRC53A6NM62 1247 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 PPFIA4O75335 1185 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 PRLRP16471 622 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 CCDC70Q6NSX1 233 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 RRAGAQ7L523 313 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 RRP36Q96EU6 259 aaKnown RBP21.17■□□□□ 0.98
SCARF1-206ENST00000573852 PNMA5Q96PV4 448 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 DEF6Q9H4E7 631 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 THRAP3Q9Y2W1 955 aaKnown RBP21.17■□□□□ 0.98
SCARF1-206ENST00000573852 AKR1B10O60218 316 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 MATR3P43243 847 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCARF1-206ENST00000573852 SLC7A5Q01650 507 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 ATP2B2Q01814 1243 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 SND1Q7KZF4 910 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCARF1-206ENST00000573852 PIGSQ96S52 555 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 NYXQ9GZU5 481 aa21.17■□□□□ 0.98
SCARF1-206ENST00000573852 ANKRD65E5RJM6 399 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 BAG3O95817 575 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 ITIH3Q06033 890 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 MAN2A1Q16706 1144 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 UNC13DQ70J99 1090 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 WDR66Q8TBY9 1149 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 MTMR9Q96QG7 549 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 NAV1Q8NEY1 1877 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 NCK2O43639 380 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 PPP4CP60510 307 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 SOGA3Q5TF21 947 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 ANKRD13CQ8N6S4 541 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 BAP1Q92560 729 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 EYA3Q99504 573 aa21.16■□□□□ 0.98
SCARF1-206ENST00000573852 CDK8P49336 464 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 SNED1Q8TER0 1413 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 MAGEA1P43355 309 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 REXO1Q8N1G1 1221 aaKnown RBP21.15■□□□□ 0.98
SCARF1-206ENST00000573852 GUF1Q8N442 669 aaKnown RBP21.15■□□□□ 0.98
SCARF1-206ENST00000573852 GLIS3Q8NEA6 775 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 FAM76AQ8TAV0 307 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 HYOU1Q9Y4L1 999 aa21.15■□□□□ 0.98
SCARF1-206ENST00000573852 PVALEFA0A1B0GWK0 134 aa21.14■□□□□ 0.98
SCARF1-206ENST00000573852 GOLGA6CA6NDK9 693 aa21.14■□□□□ 0.98
SCARF1-206ENST00000573852 SHOX2O60902 331 aaPredicted RBP21.14■□□□□ 0.98
SCARF1-206ENST00000573852 GOLGA6DP0CG33 693 aa21.14■□□□□ 0.98
SCARF1-206ENST00000573852 CCDC84Q86UT8 332 aaPredicted RBP21.14■□□□□ 0.98
SCARF1-206ENST00000573852 CCDC155Q8N6L0 562 aa21.14■□□□□ 0.98
SCARF1-206ENST00000573852 LARP4BQ92615 738 aaKnown RBP21.14■□□□□ 0.98
SCARF1-206ENST00000573852 UBA5Q9GZZ9 404 aa21.14■□□□□ 0.98
SCARF1-206ENST00000573852 GOLGA6AQ9NYA3 693 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms