RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SPZ1Q9BXG8 430 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 SIK3Q9Y2K2 1263 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 TXKP42681 527 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
NUP88-207ENST00000573584 SOGA3Q5TF21 947 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 LINC00116Q8NCU8 138 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 TBCKQ8TEA7 893 aa17.38■□□□□ 0.37
NUP88-207ENST00000573584 BAG3O95817 575 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 PRLRP16471 622 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
NUP88-207ENST00000573584 KCNQ4P56696 695 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 SPATA4Q8NEY3 305 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 VAT1LQ9HCJ6 419 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 SPATA31A1Q5TZJ5 1347 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 RASA1P20936 1047 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 RRAGAQ7L523 313 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 NBPF5PQ86XG9 351 aaPredicted RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 GPIHBP1Q8IV16 184 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 FAM76AQ8TAV0 307 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 PSMB7Q99436 277 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 NYXQ9GZU5 481 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 DMGDHQ9UI17 866 aaKnown RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 ROBO3Q96MS0 1386 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 GOLGA6CA6NDK9 693 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 GOLGA6DP0CG33 693 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 USP17L2Q6R6M4 530 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 SND1Q7KZF4 910 aaKnown RBP eCLIP17.37■□□□□ 0.37
NUP88-207ENST00000573584 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 ALS2CR12Q96Q35 445 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 OSBPL9Q96SU4 736 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 SETDB2Q96T68 719 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 GOLGA6AQ9NYA3 693 aa17.37■□□□□ 0.37
NUP88-207ENST00000573584 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
NUP88-207ENST00000573584 MYMKA6NI61 221 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 CXCR5P32302 372 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 ITIH3Q06033 890 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 MAN2A1Q16706 1144 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 NFRKBQ6P4R8 1299 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 DYMQ7RTS9 669 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 SEC63Q9UGP8 760 aaKnown RBP17.36■□□□□ 0.37
NUP88-207ENST00000573584 LRRC53A6NM62 1247 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 LCA5LO95447 670 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 TCP1P17987 556 aaKnown RBP17.36■□□□□ 0.37
NUP88-207ENST00000573584 MRPS25P82663 173 aaKnown RBP17.36■□□□□ 0.37
NUP88-207ENST00000573584 SKIDA1Q1XH10 827 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 CCDC181Q5TID7 509 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 ZNF572Q7Z3I7 529 aaPredicted RBP17.36■□□□□ 0.37
NUP88-207ENST00000573584 BLOC1S4Q9NUP1 217 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
NUP88-207ENST00000573584 FGFR1OPO95684 399 aaKnown RBP17.35■□□□□ 0.37
NUP88-207ENST00000573584 MAGEA1P43355 309 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 SLC7A5Q01650 507 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 GRB10Q13322 594 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 UNC13DQ70J99 1090 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
NUP88-207ENST00000573584 HYOU1Q9Y4L1 999 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 ERCC3P19447 782 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 GSTO1P78417 241 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 REXO1Q8N1G1 1221 aaKnown RBP17.35■□□□□ 0.37
NUP88-207ENST00000573584 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 EYA3Q99504 573 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 ZNF287Q9HBT7 754 aa17.35■□□□□ 0.37
NUP88-207ENST00000573584 GRIK5Q16478 980 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 ANKRD13CQ8N6S4 541 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 LARP4BQ92615 738 aaKnown RBP17.34■□□□□ 0.37
NUP88-207ENST00000573584 PIGSQ96S52 555 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 ANKRD65E5RJM6 399 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 MAGEA9P43362 315 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 PPP4CP60510 307 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 CALCRLQ16602 461 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 GUF1Q8N442 669 aaKnown RBP17.34■□□□□ 0.37
NUP88-207ENST00000573584 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 SMARCAL1Q9NZC9 954 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 ANKIB1Q9P2G1 1089 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 PAFAH1B1P43034 410 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 DNAJC21Q5F1R6 531 aaKnown RBP17.34■□□□□ 0.37
NUP88-207ENST00000573584 CACNA2D4Q7Z3S7 1137 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 RUBCNQ92622 972 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 MTMR9Q96QG7 549 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 SALL4Q9UJQ4 1053 aa17.34■□□□□ 0.37
NUP88-207ENST00000573584 ABCB11O95342 1321 aa17.33■□□□□ 0.37
NUP88-207ENST00000573584 IRS2Q9Y4H2 1338 aa17.33■□□□□ 0.37
NUP88-207ENST00000573584 NCK2O43639 380 aa17.33■□□□□ 0.37
NUP88-207ENST00000573584 SHOX2O60902 331 aaPredicted RBP17.33■□□□□ 0.37
NUP88-207ENST00000573584 CORO7P57737 925 aa17.33■□□□□ 0.37
NUP88-207ENST00000573584 BAP1Q92560 729 aa17.33■□□□□ 0.37
NUP88-207ENST00000573584 EHD2Q9NZN4 543 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms