RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PXMP2Q9NR77 195 aa19.85■□□□□ 0.77
LITAF-212ENST00000573332 PLXNA1Q9UIW2 1896 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 SMCO2A6NFE2 343 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 CCDC85CA6NKD9 419 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 SEPT4O43236 478 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 MSCO60682 206 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 PPFIA3O75145 1194 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 USP17L6PQ6QN14 398 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 NSUN7Q8NE18 718 aaKnown RBP19.84■□□□□ 0.77
LITAF-212ENST00000573332 SMARCC2Q8TAQ2 1214 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 LLPHQ9BRT6 129 aaKnown RBP19.84■□□□□ 0.77
LITAF-212ENST00000573332 VTA1Q9NP79 307 aa19.84■□□□□ 0.77
LITAF-212ENST00000573332 FRMPD4Q14CM0 1322 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 CD2BP2O95400 341 aaKnown RBP19.83■□□□□ 0.77
LITAF-212ENST00000573332 SGPL1O95470 568 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 MYCP01106 439 aaPredicted RBP19.83■□□□□ 0.77
LITAF-212ENST00000573332 GJA8P48165 433 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 ARHGEF16Q5VV41 709 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 FCHSD1Q86WN1 690 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 PDCD2LQ9BRP1 358 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 CRISPLD2Q9H0B8 497 aa19.83■□□□□ 0.77
LITAF-212ENST00000573332 LCTP09848 1927 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 NR3C2P08235 984 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 FDPSP14324 419 aaKnown RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 GNA11P29992 359 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 CLK2P49760 499 aaKnown RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 ADCY7P51828 1080 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 PDE4DQ08499 809 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 LHX8Q68G74 356 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 MCTP2Q6DN12 878 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 U2AF1L4Q8WU68 220 aaKnown RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 WASF1Q92558 559 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 DEFB118Q96PH6 123 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 C6orf50Q9HD87 102 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 ORC3Q9UBD5 711 aaPredicted RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 DDX20Q9UHI6 824 aaKnown RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 FAM184BQ9ULE4 1060 aa19.82■□□□□ 0.76
LITAF-212ENST00000573332 RBBP6Q7Z6E9 1792 aaKnown RBP19.82■□□□□ 0.76
LITAF-212ENST00000573332 RBM47A0AV96 593 aaKnown RBP19.81■□□□□ 0.76
LITAF-212ENST00000573332 FOSP01100 380 aaPredicted RBP19.81■□□□□ 0.76
LITAF-212ENST00000573332 AKR1A1P14550 325 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 CNGA1P29973 690 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 PGM5Q15124 567 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 STXBP2Q15833 593 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 TAPT1Q6NXT6 567 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 VSIG10LQ86VR7 867 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 CCDC83Q8IWF9 413 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 SHISA4Q96DD7 197 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 TMX3Q96JJ7 454 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 VPS54Q9P1Q0 977 aa19.81■□□□□ 0.76
LITAF-212ENST00000573332 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
LITAF-212ENST00000573332 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
LITAF-212ENST00000573332 POTEFA5A3E0 1075 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 EIF3JO75822 258 aaKnown RBP19.8■□□□□ 0.76
LITAF-212ENST00000573332 EIF2AK2P19525 551 aaKnown RBP19.8■□□□□ 0.76
LITAF-212ENST00000573332 AP3B2Q13367 1082 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 UBE2SQ16763 222 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 IQSEC1Q6DN90 963 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 GALNT17Q6IS24 598 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 XRRA1Q6P2D8 792 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 BICD2Q8TD16 824 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 OGDHLQ9ULD0 1010 aa19.8■□□□□ 0.76
LITAF-212ENST00000573332 SPDYE3A6NKU9 549 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 XBP1P17861 261 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 CCDC144BQ3MJ40 725 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 AIFM3Q96NN9 605 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 PCDHA6Q9UN73 950 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 PCDHA8Q9Y5H6 950 aa19.79■□□□□ 0.76
LITAF-212ENST00000573332 JAK2O60674 1132 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 STAM2O75886 525 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 NLRP5P59047 1200 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 HMGN5P82970 282 aaKnown RBP19.78■□□□□ 0.76
LITAF-212ENST00000573332 PCNX4Q63HM2 1172 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 EEPD1Q7L9B9 569 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 FBXO16Q8IX29 292 aaPredicted RBP19.78■□□□□ 0.76
LITAF-212ENST00000573332 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 ALG1Q9BT22 464 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 EHMT1Q9H9B1 1298 aa19.78■□□□□ 0.76
LITAF-212ENST00000573332 DUSP11O75319 330 aaKnown RBP19.77■□□□□ 0.76
LITAF-212ENST00000573332 RARBP10826 455 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 CCND2P30279 289 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 SOX10P56693 466 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 REXO1Q8N1G1 1221 aaKnown RBP19.77■□□□□ 0.76
LITAF-212ENST00000573332 ANKLE1Q8NAG6 615 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 IL31RAQ8NI17 732 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 SCFD2Q8WU76 684 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 PHF20Q9BVI0 1012 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 PDGFCQ9NRA1 345 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 PCDHA4Q9UN74 947 aa19.77■□□□□ 0.76
LITAF-212ENST00000573332 CENPFP49454 3210 aa19.77■□□□□ 0.75
LITAF-212ENST00000573332 TFRCP02786 760 aaKnown RBP19.76■□□□□ 0.75
LITAF-212ENST00000573332 MYCLP12524 364 aaPredicted RBP19.76■□□□□ 0.75
LITAF-212ENST00000573332 EN2P19622 333 aaPredicted RBP19.76■□□□□ 0.75
LITAF-212ENST00000573332 ADCYAP1R1P41586 468 aa19.76■□□□□ 0.75
LITAF-212ENST00000573332 NKX3-2P78367 333 aa19.76■□□□□ 0.75
LITAF-212ENST00000573332 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
LITAF-212ENST00000573332 TNFAIP2Q03169 654 aa19.76■□□□□ 0.75
LITAF-212ENST00000573332 NPY5RQ15761 445 aa19.76■□□□□ 0.75
LITAF-212ENST00000573332 ANO3Q9BYT9 981 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms