RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 FGAP02671 866 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 PFKMP08237 780 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 HAND2P61296 217 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 PPP2R5BQ15173 497 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 ALX1Q15699 326 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 IL27Q8NEV9 243 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 ARNTL2Q8WYA1 636 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 MYH7BA7E2Y1 1941 aa22.6■■□□□ 1.21
NUP88-203ENST00000572019 A6NJR5 290 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 POU3F3P20264 500 aaPredicted RBP22.59■■□□□ 1.21
NUP88-203ENST00000572019 CHMP4BP1P59074 171 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 PDE4DQ08499 809 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 ZNF543Q08ER8 600 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 TCTN1Q2MV58 587 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 NFRKBQ6P4R8 1299 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 ZNF589Q86UQ0 364 aaPredicted RBP22.59■■□□□ 1.21
NUP88-203ENST00000572019 HERC6Q8IVU3 1022 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 TBC1D5Q92609 795 aa22.59■■□□□ 1.21
NUP88-203ENST00000572019 GPHNQ9NQX3 736 aaPredicted RBP22.59■■□□□ 1.21
NUP88-203ENST00000572019 LCHNA4D1U4 455 aa22.58■■□□□ 1.21
NUP88-203ENST00000572019 LPXNO60711 386 aa22.58■■□□□ 1.21
NUP88-203ENST00000572019 TBC1D10CQ8IV04 446 aa22.58■■□□□ 1.21
NUP88-203ENST00000572019 SLC9A7Q96T83 725 aa22.58■■□□□ 1.21
NUP88-203ENST00000572019 LOC102724159A0A0B4J2E5 919 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 PITPNM1O00562 1244 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 GOLGA8HP0CJ92 632 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 TXNP10599 105 aaKnown RBP22.57■■□□□ 1.2
NUP88-203ENST00000572019 PWP2Q15269 919 aaKnown RBP22.57■■□□□ 1.2
NUP88-203ENST00000572019 SCFD2Q8WU76 684 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 DHX38Q92620 1227 aaKnown RBP22.57■■□□□ 1.2
NUP88-203ENST00000572019 FTOQ9C0B1 505 aaKnown RBP eCLIP22.57■■□□□ 1.2
NUP88-203ENST00000572019 TSPYL2Q9H2G4 693 aaPredicted RBP22.57■■□□□ 1.2
NUP88-203ENST00000572019 EPHX3Q9H6B9 360 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 TCP11L1Q9NUJ3 509 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 COL20A1Q9P218 1284 aa22.57■■□□□ 1.2
NUP88-203ENST00000572019 SNHG28P0DPA3 235 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 GRB10Q13322 594 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 USH1GQ495M9 461 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 GDF6Q6KF10 455 aaPredicted RBP22.56■■□□□ 1.2
NUP88-203ENST00000572019 CCDC62Q6P9F0 684 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 AFG1LQ8WV93 481 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 KHSRPQ92945 711 aaKnown RBP eCLIP22.56■■□□□ 1.2
NUP88-203ENST00000572019 LAMA4Q16363 1823 aa22.56■■□□□ 1.2
NUP88-203ENST00000572019 HSPD1P10809 573 aaKnown RBP22.55■■□□□ 1.2
NUP88-203ENST00000572019 ACTN1P12814 892 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 RFC2P35250 354 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 KAT2BQ92831 832 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 EVI5LQ96CN4 794 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 ZKSCAN3Q9BRR0 538 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 UBA5Q9GZZ9 404 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 HELLSQ9NRZ9 838 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 NEDD4P46934 1319 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 WDR19Q8NEZ3 1342 aa22.55■■□□□ 1.2
NUP88-203ENST00000572019 NKRFO15226 690 aaKnown RBP eCLIP22.54■■□□□ 1.2
NUP88-203ENST00000572019 GTPBP6O43824 516 aaPredicted RBP22.54■■□□□ 1.2
NUP88-203ENST00000572019 DEFB103AP81534 67 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 NMIQ13287 307 aaPredicted RBP22.54■■□□□ 1.2
NUP88-203ENST00000572019 PTGISQ16647 500 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 LY6KQ17RY6 165 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 RETREG2Q8NC44 543 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 DNERQ8NFT8 737 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 PHOSPHO2Q8TCD6 241 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 SIP14410 1827 aa22.54■■□□□ 1.2
NUP88-203ENST00000572019 TLL1O43897 1013 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 MMP3P08254 477 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 PLA2G5P39877 138 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 PDE1AP54750 535 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 ARHGAP1Q07960 439 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 MCMDC2Q4G0Z9 681 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 ANKRD45Q5TZF3 282 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 SEPT14Q6ZU15 432 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 TAAR1Q96RJ0 339 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 RAD50Q92878 1312 aa22.53■■□□□ 1.2
NUP88-203ENST00000572019 KPNA6O60684 536 aa22.52■■□□□ 1.2
NUP88-203ENST00000572019 WDR5P61964 334 aaKnown RBP22.52■■□□□ 1.2
NUP88-203ENST00000572019 PTPN11Q06124 597 aaPredicted RBP22.52■■□□□ 1.2
NUP88-203ENST00000572019 BFSP2Q13515 415 aa22.52■■□□□ 1.2
NUP88-203ENST00000572019 GDPD5Q8WTR4 605 aa22.52■■□□□ 1.2
NUP88-203ENST00000572019 WNT8BQ93098 351 aa22.52■■□□□ 1.2
NUP88-203ENST00000572019 NBNO60934 754 aa22.51■■□□□ 1.19
NUP88-203ENST00000572019 BRDTQ58F21 947 aaPredicted RBP22.51■■□□□ 1.19
NUP88-203ENST00000572019 CHST3Q7LGC8 479 aa22.51■■□□□ 1.19
NUP88-203ENST00000572019 SYTL5Q8TDW5 730 aaPredicted RBP22.51■■□□□ 1.19
NUP88-203ENST00000572019 NOD1Q9Y239 953 aa22.51■■□□□ 1.19
NUP88-203ENST00000572019 AAK1Q2M2I8 961 aa22.5■■□□□ 1.19
NUP88-203ENST00000572019 CD320Q9NPF0 282 aa22.5■■□□□ 1.19
NUP88-203ENST00000572019 ZMYM6O95789 1325 aa22.5■■□□□ 1.19
NUP88-203ENST00000572019 MICAL3Q7RTP6 2002 aa22.5■■□□□ 1.19
NUP88-203ENST00000572019 BAIAP3O94812 1187 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 HIC1Q14526 733 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 CDC37Q16543 378 aaPredicted RBP22.49■■□□□ 1.19
NUP88-203ENST00000572019 TRAF7Q6Q0C0 670 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 LRRC8DQ7L1W4 858 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 TTC14Q96N46 770 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 LRFN3Q9BTN0 628 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 C11orf16Q9NQ32 467 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 HDAC6Q9UBN7 1215 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 MTUS1Q9ULD2 1270 aa22.49■■□□□ 1.19
NUP88-203ENST00000572019 CCDC171Q6TFL3 1326 aa22.49■■□□□ 1.19
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