RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 EVI5LQ96CN4 794 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 SLC9A7Q96T83 725 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 HELLSQ9NRZ9 838 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 TOMM22Q9NS69 142 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 ZMYM6O95789 1325 aa13.11□□□□□ -0.31
NPLOC4-206ENST00000571714 PDE4DQ08499 809 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 GPNMBQ14956 572 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 PHOSPHO2Q8TCD6 241 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 CPVLQ9H3G5 476 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 RAD50Q92878 1312 aa13.1□□□□□ -0.31
NPLOC4-206ENST00000571714 LPXNO60711 386 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 GOLGA8HP0CJ92 632 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 ACTN1P12814 892 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 HAND2P61296 217 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 PTPN11Q06124 597 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 NEDD4P46934 1319 aa13.09□□□□□ -0.31
NPLOC4-206ENST00000571714 LCHNA4D1U4 455 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 KPNA6O60684 536 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 MMP3P08254 477 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 PDE1AP54750 535 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 ARHGAP1Q07960 439 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 SKIV2LQ15477 1246 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 TCTN1Q2MV58 587 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 USH1GQ495M9 461 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 BRDTQ58F21 947 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 ARNTL2Q8WYA1 636 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 DHX38Q92620 1227 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 KAT2BQ92831 832 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 TTC14Q96N46 770 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 TCF20Q9UGU0 1960 aaKnown RBP13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 LAMA4Q16363 1823 aa13.08□□□□□ -0.32
NPLOC4-206ENST00000571714 GTPBP6O43824 516 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 BAIAP3O94812 1187 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 WDR5P61964 334 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 GRB10Q13322 594 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 BFSP2Q13515 415 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 PTGISQ16647 500 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 GDF6Q6KF10 455 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 SESTD1Q86VW0 696 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
NPLOC4-206ENST00000571714 TLL1O43897 1013 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 PLA2G5P39877 138 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 DEFB103AP81534 67 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 RBL2Q08999 1139 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 AAK1Q2M2I8 961 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 SYTL5Q8TDW5 730 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 NOD1Q9Y239 953 aa13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 PRRC2BQ5JSZ5 2229 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-206ENST00000571714 NBNO60934 754 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 CXCL10P02778 98 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 GPATCH4Q5T3I0 446 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 MFSD6Q6ZSS7 791 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 LRRC8DQ7L1W4 858 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 WNT8BQ93098 351 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 EPHX3Q9H6B9 360 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 COG5Q9UP83 839 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 MYO9BQ13459 2157 aa13.05□□□□□ -0.32
NPLOC4-206ENST00000571714 KIAA1217Q5T5P2 1943 aa13.04□□□□□ -0.32
NPLOC4-206ENST00000571714 KIF28PB7ZC32 967 aa13.04□□□□□ -0.32
NPLOC4-206ENST00000571714 GH1P01241 217 aa13.04□□□□□ -0.32
NPLOC4-206ENST00000571714 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-206ENST00000571714 SELPP16109 830 aa13.04□□□□□ -0.32
NPLOC4-206ENST00000571714 KCNJ6P48051 423 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms