RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 GRB14Q14449 540 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
CDH11-212ENST00000566827 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 TRPV1Q8NER1 839 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 PPP1R13LQ8WUF5 828 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 USP6NLQ92738 828 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 KCNB2Q92953 911 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 ZNF333Q96JL9 665 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
CDH11-212ENST00000566827 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
CDH11-212ENST00000566827 ZBED4O75132 1171 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 CD2BP2O95400 341 aaKnown RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 CALML3P27482 149 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 CACNB2Q08289 660 aaPredicted RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 ANKRD35Q8N283 1001 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 CHURC1Q8WUH1 139 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 MMP19Q99542 508 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 PIF1Q9H611 641 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 FCER1AP12319 257 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 MAPK4P31152 587 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
CDH11-212ENST00000566827 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 CLEC4DQ8WXI8 215 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 DEFB118Q96PH6 123 aa12.63□□□□□ -0.39
CDH11-212ENST00000566827 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 SORBS3O60504 671 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 CNGA1P29973 690 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
CDH11-212ENST00000566827 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
CDH11-212ENST00000566827 GRM4Q14833 912 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 RUFY3Q7L099 469 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 AIFM3Q96NN9 605 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 CCNA1P78396 465 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 SDE2Q6IQ49 451 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
CDH11-212ENST00000566827 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 PHOX2BQ99453 314 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
CDH11-212ENST00000566827 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
CDH11-212ENST00000566827 REV3LO60673 3130 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 TRIOBPQ9H2D6 2365 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 CREB3O43889 395 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 ICAM1P05362 532 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 CCL5P13501 91 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
CDH11-212ENST00000566827 KCTD2Q14681 263 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 CCDC181Q5TID7 509 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 CFBP00751 764 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 PAX3P23760 479 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 SERPINB4P48594 390 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 AK2P54819 239 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 FAM160B2Q86V87 743 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 TMEM87BQ96K49 555 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 PDGFCQ9NRA1 345 aa12.61□□□□□ -0.39
CDH11-212ENST00000566827 NEK4P51957 841 aa12.6□□□□□ -0.39
CDH11-212ENST00000566827 FOXD4Q12950 439 aaPredicted RBP12.6□□□□□ -0.39
CDH11-212ENST00000566827 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
CDH11-212ENST00000566827 GPATCH4Q5T3I0 446 aaKnown RBP12.6□□□□□ -0.39
CDH11-212ENST00000566827 USP17L6PQ6QN14 398 aa12.6□□□□□ -0.39
CDH11-212ENST00000566827 CYP39A1Q9NYL5 469 aa12.6□□□□□ -0.39
CDH11-212ENST00000566827 ZBTB43O43298 467 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 PDIA3P30101 505 aaKnown RBP12.59□□□□□ -0.39
CDH11-212ENST00000566827 LIFRP42702 1097 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 NFKBIBQ15653 356 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 SGMS1Q86VZ5 419 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
CDH11-212ENST00000566827 APBA2Q99767 749 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 PCDHA1Q9Y5I3 950 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
CDH11-212ENST00000566827 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.59□□□□□ -0.39
CDH11-212ENST00000566827 GOLGA8AA7E2F4 631 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 RGS2P41220 211 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 FUT2Q10981 343 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 IL31RAQ8NI17 732 aa12.59□□□□□ -0.39
CDH11-212ENST00000566827 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms