RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GHRHRQ02643 423 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 CACNB2Q08289 660 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 TOB2Q14106 344 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 MAMDC4Q6UXC1 1216 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 MICU3Q86XE3 530 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ANKRD35Q8N283 1001 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 SRBD1Q8N5C6 995 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 MSL3Q8N5Y2 521 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 RGS22Q8NE09 1264 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 BRF1Q92994 677 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 DDX11Q96FC9 970 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 PIGSQ96S52 555 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 LZTS2Q9BRK4 669 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 UPF3BQ9BZI7 483 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 UNC93B1Q9H1C4 597 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 VAT1LQ9HCJ6 419 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 CYP39A1Q9NYL5 469 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 CYP46A1Q9Y6A2 500 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 RPTORQ8N122 1335 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ZNFX1Q9P2E3 1918 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 RBBP6Q7Z6E9 1792 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 KLF18A0A0U1RQI7 1052 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 OPLAHO14841 1288 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ZBTB43O43298 467 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 PLEKHA8P1O95397 391 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 GJB1P08034 283 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 CCL5P13501 91 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 RGS19P49795 217 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 FUT2Q10981 343 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 PPP2R5BQ15173 497 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 TMTC3Q6ZXV5 915 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 TATDN2Q93075 761 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 TINF2Q9BSI4 451 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 AMNQ9BXJ7 453 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ALDH8A1Q9H2A2 487 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 BIN2Q9UBW5 565 aaPredicted RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ASTN1O14525 1302 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 PFASO15067 1338 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 ABCB11O95342 1321 aa7.18□□□□□ -1.26
CNOT1-204ENST00000563130 KIAA0100Q14667 2235 aaKnown RBP7.18□□□□□ -1.26
CNOT1-204ENST00000563130 PNMA6FA0A0J9YX94 578 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 DHX16O60231 1041 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CYBAP13498 195 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CDC27P30260 824 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CYP2C19P33261 490 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CNTN2Q02246 1040 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 APOBRQ0VD83 1088 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 USH1GQ495M9 461 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 MFSD14CQ5VZR4 134 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 SYNE3Q6ZMZ3 975 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CCDC144CPQ8IYA2 1237 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 CMTR1Q8N1G2 835 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 HMX1Q9NP08 348 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 RBM28Q9NW13 759 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 NRBP1Q9UHY1 535 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 SOWAHBA6NEL2 793 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 SNAI1O95863 264 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 MYCP01106 439 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 GJA8P48165 433 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 SOX10P56693 466 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 RPS6P62753 249 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 FGD1P98174 961 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 BAATQ14032 418 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 NSMFQ6X4W1 530 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 HOMER1Q86YM7 354 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 TRPV1Q8NER1 839 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 TBC1D5Q92609 795 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 KIF2CQ99661 725 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 MRPL11Q9Y3B7 192 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 PCDHA1Q9Y5I3 950 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 SYNGAP1Q96PV0 1343 aa7.17□□□□□ -1.26
CNOT1-204ENST00000563130 BAZ2BQ9UIF8 2168 aaKnown RBP7.17□□□□□ -1.26
CNOT1-204ENST00000563130 PLXNA1Q9UIW2 1896 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 MKI67P46013 3256 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 LOC102724159A0A0B4J2E5 919 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SGPL1O95470 568 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 CAPN2P17655 700 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 PDIA3P30101 505 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 CCND3P30281 292 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 ADD1P35611 737 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 RBM25P49756 843 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 TRAF1Q13077 416 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 PWP2Q15269 919 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 NTRK3Q16288 839 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 RTN1Q16799 776 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SLC30A10Q6XR72 485 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 RNF207Q6ZRF8 634 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 NUDT18Q6ZVK8 323 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 MORC4Q8TE76 937 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 U2AF1L4Q8WU68 220 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 SHISA4Q96DD7 197 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 ZNF274Q96GC6 653 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 PURBQ96QR8 312 aaKnown RBP7.16□□□□□ -1.26
CNOT1-204ENST00000563130 KATNBL1Q9H079 304 aa7.16□□□□□ -1.26
CNOT1-204ENST00000563130 PDRG1Q9NUG6 133 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms