RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 MUM1L1Q5H9M0 696 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 NFRKBQ6P4R8 1299 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 ZNF687Q8N1G0 1237 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 CHURC1Q8WUH1 139 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 ARNTL2Q8WYA1 636 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 CTAGE1Q96RT6 745 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 CERS4Q9HA82 394 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 ZNF287Q9HBT7 754 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 ZBTB40Q9NUA8 1239 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 MYH4Q9Y623 1939 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 TANC1Q9C0D5 1861 aa9.91□□□□□ -0.82
CKLF-208ENST00000563092 A6NJR5 290 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 MINDY4BA8MYZ0 360 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 HMMRO75330 724 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 PRDM1O75626 825 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 CPT1AP50416 773 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 RBL2Q08999 1139 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 KIAA1211Q6ZU35 1233 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 DEFB128Q7Z7B8 93 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 ZNF444Q8N0Y2 327 aaPredicted RBP9.9□□□□□ -0.82
CKLF-208ENST00000563092 KBTBD3Q8NAB2 608 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 PANK1Q8TE04 598 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 APPBP2Q92624 585 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
CKLF-208ENST00000563092 MTG1Q9BT17 334 aaPredicted RBP9.9□□□□□ -0.82
CKLF-208ENST00000563092 SCN5AQ14524 2016 aa9.9□□□□□ -0.82
CKLF-208ENST00000563092 PTPRSQ13332 1948 aa9.9□□□□□ -0.83
CKLF-208ENST00000563092 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 LCHNA4D1U4 455 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 FAM86C2PA6NEL3 165 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 KIF28PB7ZC32 967 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 KPNA6O60684 536 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 CXCL10P02778 98 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 ICAM1P05362 532 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 ALAS1P13196 640 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 GNAT2P19087 354 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 EDNRBP24530 442 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 WDR5P61964 334 aaKnown RBP9.89□□□□□ -0.83
CKLF-208ENST00000563092 LRRFIP1Q32MZ4 808 aaKnown RBP9.89□□□□□ -0.83
CKLF-208ENST00000563092 LEXMQ3ZCV2 418 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 EEPD1Q7L9B9 569 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 RANBP17Q9H2T7 1088 aaKnown RBP9.89□□□□□ -0.83
CKLF-208ENST00000563092 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 BRWD1Q9NSI6 2320 aa9.89□□□□□ -0.83
CKLF-208ENST00000563092 NKRFO15226 690 aaKnown RBP eCLIP9.88□□□□□ -0.83
CKLF-208ENST00000563092 RNF113AO15541 343 aaKnown RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 GPAA1O43292 621 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 MCCP23508 829 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 SLC1A4P43007 532 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 ALDH5A1P51649 535 aaPredicted RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 ERVK-21P61565 698 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 BFSP2Q13515 415 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 COL19A1Q14993 1142 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 ALYREFQ86V81 257 aaKnown RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 SESTD1Q86VW0 696 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 STK11IPQ8N1F8 1099 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 FBXO22Q8NEZ5 403 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 KCNH6Q9H252 994 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 UBE2ZQ9H832 354 aaPredicted RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 IL17RBQ9NRM6 502 aa9.88□□□□□ -0.83
CKLF-208ENST00000563092 ADD3Q9UEY8 706 aaKnown RBP9.88□□□□□ -0.83
CKLF-208ENST00000563092 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
CKLF-208ENST00000563092 PATL2C9JE40 543 aaKnown RBP9.87□□□□□ -0.83
CKLF-208ENST00000563092 M0R2C6 588 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 GJB5O95377 273 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 ZFYP08048 801 aaPredicted RBP9.87□□□□□ -0.83
CKLF-208ENST00000563092 TSPY3P0CV98 308 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 TSPY8P0CW00 308 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 TFAP4Q01664 338 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 BAATQ14032 418 aaPredicted RBP9.87□□□□□ -0.83
CKLF-208ENST00000563092 PPP4R3BQ5MIZ7 849 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 KCTD1Q719H9 257 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 IFNL3Q8IZI9 196 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 GJD3Q8N144 294 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 RETREG2Q8NC44 543 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 TET1Q8NFU7 2136 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 CAGE1Q8TC20 777 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 NEK9Q8TD19 979 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 CLEC4DQ8WXI8 215 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 CCPG1Q9ULG6 757 aa9.87□□□□□ -0.83
CKLF-208ENST00000563092 LINC01553A4QN01 128 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 NFIBO00712 420 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 FOXP2O15409 715 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 PARNO95453 639 aaKnown RBP9.86□□□□□ -0.83
CKLF-208ENST00000563092 MYL3P08590 195 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 TDO2P48775 406 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 SNAP25P60880 206 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 DEFB103AP81534 67 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 PDE4BQ07343 736 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 TCTN1Q2MV58 587 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 CCDC62Q6P9F0 684 aa9.86□□□□□ -0.83
CKLF-208ENST00000563092 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms