RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 ZHX1Q9UKY1 873 aaPredicted RBP16.07■□□□□ 0.16
IFT140-205ENST00000561954 ASTN1O14525 1302 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 LCTP09848 1927 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 DOCK3Q8IZD9 2030 aa16.07■□□□□ 0.16
IFT140-205ENST00000561954 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 SEPT4O43236 478 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 AKR1A1P14550 325 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 UNC93B1Q9H1C4 597 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 ORC3Q9UBD5 711 aaPredicted RBP16.06■□□□□ 0.16
IFT140-205ENST00000561954 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
IFT140-205ENST00000561954 MEIS2O14770 477 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 CTDNEP1O95476 244 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
IFT140-205ENST00000561954 GJB1P08034 283 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
IFT140-205ENST00000561954 CCND2P30279 289 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 MTFR1Q15390 333 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 GALNT17Q6IS24 598 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 XRRA1Q6P2D8 792 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 FCHSD1Q86WN1 690 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
IFT140-205ENST00000561954 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
IFT140-205ENST00000561954 VPS54Q9P1Q0 977 aa16.05■□□□□ 0.16
IFT140-205ENST00000561954 DDX20Q9UHI6 824 aaKnown RBP16.05■□□□□ 0.16
IFT140-205ENST00000561954 BAZ2BQ9UIF8 2168 aaKnown RBP16.04■□□□□ 0.16
IFT140-205ENST00000561954 CCDC85CA6NKD9 419 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 PPFIA3O75145 1194 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 STAM2O75886 525 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
IFT140-205ENST00000561954 MYCP01106 439 aaPredicted RBP16.04■□□□□ 0.16
IFT140-205ENST00000561954 CNGA1P29973 690 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
IFT140-205ENST00000561954 NLRP5P59047 1200 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 TRIM29Q14134 588 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 STXBP2Q15833 593 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 UBE2SQ16763 222 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 TMX3Q96JJ7 454 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 TAAR1Q96RJ0 339 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 BRMS1Q9HCU9 246 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
IFT140-205ENST00000561954 ZNFX1Q9P2E3 1918 aaKnown RBP16.04■□□□□ 0.16
IFT140-205ENST00000561954 ZNF865P0CJ78 1059 aaPredicted RBP16.03■□□□□ 0.16
IFT140-205ENST00000561954 RARBP10826 455 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 ST3GAL1Q11201 340 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 PGM5Q15124 567 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 FBXO16Q8IX29 292 aaPredicted RBP16.03■□□□□ 0.16
IFT140-205ENST00000561954 DAGLBQ8NCG7 672 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 TRPV1Q8NER1 839 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 KATNBL1Q9H079 304 aa16.03■□□□□ 0.16
IFT140-205ENST00000561954 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.03■□□□□ 0.16
IFT140-205ENST00000561954 JAK2O60674 1132 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 EIF3JO75822 258 aaKnown RBP16.02■□□□□ 0.16
IFT140-205ENST00000561954 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
IFT140-205ENST00000561954 NR3C2P08235 984 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 GJA8P48165 433 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
IFT140-205ENST00000561954 GNPTABQ3T906 1256 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.16
IFT140-205ENST00000561954 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 DEFB118Q96PH6 123 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 ANO3Q9BYT9 981 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 PCDHA4Q9UN74 947 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.16
IFT140-205ENST00000561954 SMCHD1A6NHR9 2005 aa16.02■□□□□ 0.15
IFT140-205ENST00000561954 BRCA2P51587 3418 aa16.01■□□□□ 0.15
IFT140-205ENST00000561954 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
IFT140-205ENST00000561954 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
IFT140-205ENST00000561954 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
IFT140-205ENST00000561954 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
IFT140-205ENST00000561954 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
IFT140-205ENST00000561954 SGPL1O95470 568 aa16■□□□□ 0.15
IFT140-205ENST00000561954 MYCLP12524 364 aaPredicted RBP16■□□□□ 0.15
IFT140-205ENST00000561954 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
IFT140-205ENST00000561954 SREBF1P36956 1147 aa16■□□□□ 0.15
IFT140-205ENST00000561954 TTLL4Q14679 1199 aa16■□□□□ 0.15
IFT140-205ENST00000561954 PRAMEF19Q5SWL8 479 aa16■□□□□ 0.15
IFT140-205ENST00000561954 KCNV1Q6PIU1 500 aa16■□□□□ 0.15
IFT140-205ENST00000561954 EEPD1Q7L9B9 569 aa16■□□□□ 0.15
IFT140-205ENST00000561954 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
IFT140-205ENST00000561954 BLIDQ8IZY5 108 aa16■□□□□ 0.15
IFT140-205ENST00000561954 ANKLE1Q8NAG6 615 aa16■□□□□ 0.15
IFT140-205ENST00000561954 SNX21Q969T3 373 aa16■□□□□ 0.15
IFT140-205ENST00000561954 AIFM3Q96NN9 605 aa16■□□□□ 0.15
IFT140-205ENST00000561954 PHF20Q9BVI0 1012 aa16■□□□□ 0.15
IFT140-205ENST00000561954 CRISPLD2Q9H0B8 497 aa16■□□□□ 0.15
IFT140-205ENST00000561954 XPNPEP3Q9NQH7 507 aa16■□□□□ 0.15
IFT140-205ENST00000561954 RBM47A0AV96 593 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms