RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CCL14Q16627 93 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 SLC30A10Q6XR72 485 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 SEPT14Q6ZU15 432 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.25□□□□□ -0.45
TPM1-229ENST00000561242 TRIB2Q92519 343 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 USP6NLQ92738 828 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 C8orf76Q96K31 380 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 TAAR1Q96RJ0 339 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 DDX20Q9UHI6 824 aaKnown RBP12.25□□□□□ -0.45
TPM1-229ENST00000561242 MRVI1Q9Y6F6 885 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 CNTNAP5Q8WYK1 1306 aa12.25□□□□□ -0.45
TPM1-229ENST00000561242 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
TPM1-229ENST00000561242 SEPT4O43236 478 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 GJB1P08034 283 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 NR3C2P08235 984 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 JAKMIP3Q5VZ66 844 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 MAMDC4Q6UXC1 1216 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 FAM133AQ8N9E0 248 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 GIMAP8Q8ND71 665 aaPredicted RBP12.24□□□□□ -0.45
TPM1-229ENST00000561242 SCFD2Q8WU76 684 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 ZNF333Q96JL9 665 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 PXMP2Q9NR77 195 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 STK36Q9NRP7 1315 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
TPM1-229ENST00000561242 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 STXBP3O00186 592 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 PIK3CDO00329 1044 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
TPM1-229ENST00000561242 PDIA4P13667 645 aaKnown RBP12.23□□□□□ -0.45
TPM1-229ENST00000561242 KRT2P35908 639 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 HSD17B4P51659 736 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 FOSBP53539 338 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 BLIDQ8IZY5 108 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 PCSK9Q8NBP7 692 aaKnown RBP12.23□□□□□ -0.45
TPM1-229ENST00000561242 XPNPEP3Q9NQH7 507 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 FAM217BQ9NTX9 383 aaPredicted RBP12.23□□□□□ -0.45
TPM1-229ENST00000561242 NOL7Q9UMY1 257 aaKnown RBP12.23□□□□□ -0.45
TPM1-229ENST00000561242 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 LOC285556D6RIA3 1793 aa12.23□□□□□ -0.45
TPM1-229ENST00000561242 ESYT2A0FGR8 921 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
TPM1-229ENST00000561242 MAFGO15525 162 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
TPM1-229ENST00000561242 SGPL1O95470 568 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 NEDD9Q14511 834 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 UBE2SQ16763 222 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 DHX37Q8IY37 1157 aaKnown RBP12.22□□□□□ -0.45
TPM1-229ENST00000561242 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
TPM1-229ENST00000561242 TNPO1Q92973 898 aaKnown RBP12.22□□□□□ -0.45
TPM1-229ENST00000561242 TMX3Q96JJ7 454 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
TPM1-229ENST00000561242 NID2Q14112 1375 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 PHIPQ8WWQ0 1821 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 DYNC1LI2O43237 492 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 PPP1R11O60927 126 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 TGFB3P10600 412 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 TAL1P17542 331 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 CCND3P30281 292 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 CPT1AP50416 773 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 PGM5Q15124 567 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 NONOQ15233 471 aaKnown RBP eCLIP12.21□□□□□ -0.45
TPM1-229ENST00000561242 MTFR1Q15390 333 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 CCDC144BQ3MJ40 725 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 LARP1BQ659C4 914 aaKnown RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 FBXO16Q8IX29 292 aaPredicted RBP12.21□□□□□ -0.45
TPM1-229ENST00000561242 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 TBC1D5Q92609 795 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 PDCD2LQ9BRP1 358 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
TPM1-229ENST00000561242 FIBPO43427 364 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 KPNA6O60684 536 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 DUSP11O75319 330 aaKnown RBP12.2□□□□□ -0.46
TPM1-229ENST00000561242 GH1P01241 217 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 GJA8P48165 433 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 SOX10P56693 466 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 CHMP4BP1P59074 171 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 FUT2Q10981 343 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
TPM1-229ENST00000561242 NTRK3Q16288 839 aa12.2□□□□□ -0.46
TPM1-229ENST00000561242 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms