RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GJB5O95377 273 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 CXCL10P02778 98 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 EDNRBP24530 442 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 SSTR3P32745 418 aaPredicted RBP11.76□□□□□ -0.53
TPM1-225ENST00000560679 TFAP4Q01664 338 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 RBL2Q08999 1139 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 BFSP2Q13515 415 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
TPM1-225ENST00000560679 PTCRAQ6ISU1 281 aaPredicted RBP11.76□□□□□ -0.53
TPM1-225ENST00000560679 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 UIMC1Q96RL1 719 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 TGS1Q96RS0 853 aaKnown RBP11.76□□□□□ -0.53
TPM1-225ENST00000560679 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
TPM1-225ENST00000560679 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
TPM1-225ENST00000560679 NMT2O60551 498 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 HMMRO75330 724 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 ARIH2O95376 493 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
TPM1-225ENST00000560679 PTGISQ16647 500 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
TPM1-225ENST00000560679 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 TRAF7Q6Q0C0 670 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 LRRC8DQ7L1W4 858 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 CAGE1Q8TC20 777 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 NEK9Q8TD19 979 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 RAD9AQ99638 391 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
TPM1-225ENST00000560679 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
TPM1-225ENST00000560679 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
TPM1-225ENST00000560679 RAD50Q92878 1312 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
TPM1-225ENST00000560679 MICAL3Q7RTP6 2002 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 H3BQ06 376 aaPredicted RBP11.74□□□□□ -0.53
TPM1-225ENST00000560679 NKRFO15226 690 aaKnown RBP eCLIP11.74□□□□□ -0.53
TPM1-225ENST00000560679 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
TPM1-225ENST00000560679 DCXO43602 365 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 NEFLP07196 543 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 ALADP13716 330 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 SELPP16109 830 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 GNAT2P19087 354 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
TPM1-225ENST00000560679 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 KAT2BQ92831 832 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 WNT8BQ93098 351 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 ZBED2Q9BTP6 218 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 STX8Q9UNK0 236 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 NOD1Q9Y239 953 aa11.74□□□□□ -0.53
TPM1-225ENST00000560679 PTPDC1A2A3K4 754 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
TPM1-225ENST00000560679 FOXP2O15409 715 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 KPNA6O60684 536 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 APPP05067 770 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 MMP3P08254 477 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 CKBP12277 381 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 CALML3P27482 149 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 SLC16A2P36021 539 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 NOVP48745 357 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 ZP2Q05996 745 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 PDE4BQ07343 736 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 PPARAQ07869 468 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 COL4A6Q14031 1691 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 MBTPS1Q14703 1052 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 BRDTQ58F21 947 aaPredicted RBP11.73□□□□□ -0.53
TPM1-225ENST00000560679 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 BTNL9Q6UXG8 535 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 CCDC155Q8N6L0 562 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 SCFD2Q8WU76 684 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 SEC62Q99442 399 aaKnown RBP11.73□□□□□ -0.53
TPM1-225ENST00000560679 PHOX2BQ99453 314 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 KCNH6Q9H252 994 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 INCENPQ9NQS7 918 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
TPM1-225ENST00000560679 DMDP11532 3685 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 TXNP10599 105 aaKnown RBP11.72□□□□□ -0.53
TPM1-225ENST00000560679 RPS6P62753 249 aaKnown RBP11.72□□□□□ -0.53
TPM1-225ENST00000560679 PDE4DQ08499 809 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
TPM1-225ENST00000560679 SYDE2Q5VT97 1194 aa11.72□□□□□ -0.53
TPM1-225ENST00000560679 CCDC62Q6P9F0 684 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms