RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 BLIDQ8IZY5 108 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 REXO1Q8N1G1 1221 aaKnown RBP12□□□□□ -0.49
LRRC28-204ENST00000558172 TAAR1Q96RJ0 339 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 TINF2Q9BSI4 451 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 PTCH2Q9Y6C5 1203 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
LRRC28-204ENST00000558172 DTNBO60941 627 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 MMP1P03956 469 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
LRRC28-204ENST00000558172 GRK4P32298 578 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRRC28-204ENST00000558172 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 KRT40Q6A162 431 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 XRRA1Q6P2D8 792 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 FBXO18Q8NFZ0 1043 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 MORC4Q8TE76 937 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 SHISA4Q96DD7 197 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 PXMP2Q9NR77 195 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 BIN2Q9UBW5 565 aaPredicted RBP11.99□□□□□ -0.49
LRRC28-204ENST00000558172 PCDHA6Q9UN73 950 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 KCNJ14Q9UNX9 436 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 PCDHA8Q9Y5H6 950 aa11.99□□□□□ -0.49
LRRC28-204ENST00000558172 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 IGHA2P01877 340 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 HMGCRP04035 888 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 KRT2P35908 639 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 ANP32AP39687 249 aaKnown RBP11.98□□□□□ -0.49
LRRC28-204ENST00000558172 CCL14Q16627 93 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 UBE2SQ16763 222 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
LRRC28-204ENST00000558172 TRIB2Q92519 343 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 FGD4Q96M96 766 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 PURBQ96QR8 312 aaKnown RBP11.98□□□□□ -0.49
LRRC28-204ENST00000558172 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 FLRT1Q9NZU1 646 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
LRRC28-204ENST00000558172 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 RPTORQ8N122 1335 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 H3BQV1 296 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 M0R2N6 131 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 STAM2O75886 525 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 NR3C2P08235 984 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 ELNP15502 786 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
LRRC28-204ENST00000558172 EDNRBP24530 442 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 CCND2P30279 289 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 UBXN2AP68543 259 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 PDE4DQ08499 809 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 PGM5Q15124 567 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 NPY5RQ15761 445 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 STXBP2Q15833 593 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 SLC9C1Q4G0N8 1177 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 JAKMIP3Q5VZ66 844 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 KRT25Q7Z3Z0 450 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 VSIG10LQ86VR7 867 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 ABHD16BQ9H3Z7 469 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 GJB4Q9NTQ9 266 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
LRRC28-204ENST00000558172 CNPY2Q9Y2B0 182 aa11.97□□□□□ -0.49
LRRC28-204ENST00000558172 ASTN1O14525 1302 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 CCDC194A0A1B0GVG4 234 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 EIF3JO75822 258 aaKnown RBP11.96□□□□□ -0.49
LRRC28-204ENST00000558172 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-204ENST00000558172 CYP2C19P33261 490 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 PCNX4Q63HM2 1172 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 DIS3L2Q8IYB7 885 aaKnown RBP11.96□□□□□ -0.49
LRRC28-204ENST00000558172 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 FOXP1Q9H334 677 aaPredicted RBP11.96□□□□□ -0.49
LRRC28-204ENST00000558172 VTA1Q9NP79 307 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
LRRC28-204ENST00000558172 BTBD18B2RXH4 712 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 INHAP05111 366 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 CYP3A4P08684 503 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 MYCLP12524 364 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-204ENST00000558172 SREBF1P36956 1147 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 USP11P51784 963 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 FOSBP53539 338 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 CACNB2Q08289 660 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-204ENST00000558172 ACVR2BQ13705 512 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 GNL2Q13823 731 aaKnown RBP11.95□□□□□ -0.5
LRRC28-204ENST00000558172 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
LRRC28-204ENST00000558172 MAP3K21Q5TCX8 1036 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
LRRC28-204ENST00000558172 DAXXQ9UER7 740 aaPredicted RBP11.95□□□□□ -0.5
LRRC28-204ENST00000558172 ADAMTS3O15072 1205 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 MAFGO15525 162 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
LRRC28-204ENST00000558172 SYT1P21579 422 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 U2AF2P26368 475 aaKnown RBP eCLIP11.94□□□□□ -0.5
LRRC28-204ENST00000558172 GNPTABQ3T906 1256 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 KCNV1Q6PIU1 500 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 NLRX1Q86UT6 975 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
LRRC28-204ENST00000558172 SH3TC2Q8TF17 1288 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms