RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PPP6R2O75170 966 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 XBP1P17861 261 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 RPS12P25398 132 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 SMARCA1P28370 1054 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 MARCKSP29966 332 aaPredicted RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 ME1P48163 572 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 GMPSP49915 693 aaPredicted RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 MRE11P49959 708 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 NLRP5P59047 1200 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 GNL2Q13823 731 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 ABCB5Q2M3G0 1257 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 ASPRV1Q53RT3 343 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 L1TD1Q5T7N2 865 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 ADALQ6DHV7 355 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 TTBK2Q6IQ55 1244 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 RBM43Q6ZSC3 357 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 TMEM179Q6ZVK1 233 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 FAM83AQ86UY5 434 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 FSIP1Q8NA03 581 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 PANK2Q9BZ23 570 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 TMEM39BQ9GZU3 492 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 VEZTQ9HBM0 779 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 SPON1Q9HCB6 807 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 CABP5Q9NP86 173 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 SH3GLB2Q9NR46 395 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 TMOD2Q9NZR1 351 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 NYAP2Q9P242 653 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 SCAF8Q9UPN6 1271 aaKnown RBP8.46□□□□□ -1.06
SPG11-204ENST00000557866 PCDHB6Q9Y5E3 794 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 ZNF541Q9H0D2 1346 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 MYH1P12882 1939 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 TCHHQ07283 1943 aa8.46□□□□□ -1.06
SPG11-204ENST00000557866 SIPA1L1O43166 1804 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 LETM1O95202 739 aaPredicted RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 GH2P01242 217 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 CMA1P23946 247 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 NDUFA8P51970 172 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 ATP2B2Q01814 1243 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 MAP3K10Q02779 954 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 GRIN1Q05586 938 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 CAMK4Q16566 473 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 SHC4Q6S5L8 630 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 FMR1NBQ8N0W7 255 aaPredicted RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 DAGLBQ8NCG7 672 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 BANK1Q8NDB2 785 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 MRPS27Q92552 414 aaKnown RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 DPF2Q92785 391 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 PIGSQ96S52 555 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 TSPY26PQ9H489 355 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 KANSL2Q9H9L4 492 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 VAT1LQ9HCJ6 419 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 BARHL2Q9NY43 387 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 HERC5Q9UII4 1024 aaKnown RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 PCDHA4Q9UN74 947 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 ASTN2O75129 1339 aaPredicted RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 BRCA1P38398 1863 aaKnown RBP8.45□□□□□ -1.06
SPG11-204ENST00000557866 FER1L6Q2WGJ9 1857 aa8.45□□□□□ -1.06
SPG11-204ENST00000557866 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 A0A1B0GVL5 298 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 A0A1W2PRG0 241 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 PPP1R11O60927 126 aaPredicted RBP8.44□□□□□ -1.06
SPG11-204ENST00000557866 NDUFB10O96000 172 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 ATP2B1P20020 1258 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 VEGFBP49765 207 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 MMP14P50281 582 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 ICA1Q05084 483 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 CBLBQ13191 982 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 RASA3Q14644 834 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 RILPL1Q5EBL4 403 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 SLFN13Q68D06 897 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 PIK3AP1Q6ZUJ8 805 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 KCTD1Q719H9 257 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 MIGA2Q7L4E1 593 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 HEATR3Q7Z4Q2 680 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 HOMER1Q86YM7 354 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 BLIDQ8IZY5 108 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 MTMR8Q96EF0 704 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 RRP36Q96EU6 259 aaKnown RBP8.44□□□□□ -1.06
SPG11-204ENST00000557866 TEPSINQ96N21 525 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPG11-204ENST00000557866 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.44□□□□□ -1.06
SPG11-204ENST00000557866 CNOT7Q9UIV1 285 aaKnown RBP8.44□□□□□ -1.06
SPG11-204ENST00000557866 FBXO2Q9UK22 296 aaPredicted RBP8.44□□□□□ -1.06
SPG11-204ENST00000557866 PCDHA6Q9UN73 950 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 HPSEQ9Y251 543 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 PCDHA8Q9Y5H6 950 aa8.44□□□□□ -1.06
SPG11-204ENST00000557866 MORC2Q9Y6X9 1032 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms