RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ZNF543Q08ER8 600 aa18.55■□□□□ 0.56
RCCD1-207ENST00000556774 BRDTQ58F21 947 aaPredicted RBP18.55■□□□□ 0.56
RCCD1-207ENST00000556774 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
RCCD1-207ENST00000556774 ZNF589Q86UQ0 364 aaPredicted RBP18.55■□□□□ 0.56
RCCD1-207ENST00000556774 SCFD2Q8WU76 684 aa18.55■□□□□ 0.56
RCCD1-207ENST00000556774 TSPYL2Q9H2G4 693 aaPredicted RBP18.55■□□□□ 0.56
RCCD1-207ENST00000556774 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
RCCD1-207ENST00000556774 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 EPOPA6NHQ4 379 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 ARHGEF15O94989 841 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 ARIH2O95376 493 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 ACTN1P12814 892 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 RFC2P35250 354 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 CHMP4BP1P59074 171 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 SKIV2LQ15477 1246 aaKnown RBP18.54■□□□□ 0.56
RCCD1-207ENST00000556774 USH1GQ495M9 461 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 MCMDC2Q4G0Z9 681 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 NFRKBQ6P4R8 1299 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 TBC1D10CQ8IV04 446 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 DNERQ8NFT8 737 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 SLC9A7Q96T83 725 aa18.54■□□□□ 0.56
RCCD1-207ENST00000556774 MPHOSPH6Q99547 160 aaKnown RBP18.54■□□□□ 0.56
RCCD1-207ENST00000556774 A6NJR5 290 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 SNHG28P0DPA3 235 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 TXNP10599 105 aaKnown RBP18.53■□□□□ 0.56
RCCD1-207ENST00000556774 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
RCCD1-207ENST00000556774 PDE1AP54750 535 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
RCCD1-207ENST00000556774 RETREG2Q8NC44 543 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
RCCD1-207ENST00000556774 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 PNMA2Q9UL42 364 aa18.53■□□□□ 0.56
RCCD1-207ENST00000556774 KPNA6O60684 536 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 KCNQ1P51787 676 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 KRT40Q6A162 431 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 NOD1Q9Y239 953 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 MTCH2Q9Y6C9 303 aa18.52■□□□□ 0.56
RCCD1-207ENST00000556774 NEDD4P46934 1319 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 CCDC171Q6TFL3 1326 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 GTPBP6O43824 516 aaPredicted RBP18.51■□□□□ 0.55
RCCD1-207ENST00000556774 BMP1P13497 986 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 PTPN11Q06124 597 aaPredicted RBP18.51■□□□□ 0.55
RCCD1-207ENST00000556774 BFSP2Q13515 415 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 MFSD6Q6ZSS7 791 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 HERC6Q8IVU3 1022 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 ARNTL2Q8WYA1 636 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 ZKSCAN3Q9BRR0 538 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 BRWD1Q9NSI6 2320 aa18.51■□□□□ 0.55
RCCD1-207ENST00000556774 TAP1Q03518 808 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 SPRED2Q7Z698 418 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 PHOSPHO2Q8TCD6 241 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 AFG1LQ8WV93 481 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 TTC14Q96N46 770 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 MYH7BA7E2Y1 1941 aa18.5■□□□□ 0.55
RCCD1-207ENST00000556774 B4DLN1 442 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 MMP3P08254 477 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 MRPL12P52815 198 aaKnown RBP18.49■□□□□ 0.55
RCCD1-207ENST00000556774 CDC37Q16543 378 aaPredicted RBP18.49■□□□□ 0.55
RCCD1-207ENST00000556774 PTGISQ16647 500 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 AAK1Q2M2I8 961 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 GPATCH4Q5T3I0 446 aaKnown RBP18.49■□□□□ 0.55
RCCD1-207ENST00000556774 CCDC62Q6P9F0 684 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 TBC1D5Q92609 795 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 CTAGE1Q96RT6 745 aa18.49■□□□□ 0.55
RCCD1-207ENST00000556774 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 BAIAP3O94812 1187 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 PCP11498 1178 aaKnown RBP18.48■□□□□ 0.55
RCCD1-207ENST00000556774 POU3F3P20264 500 aaPredicted RBP18.48■□□□□ 0.55
RCCD1-207ENST00000556774 RRP1P56182 461 aaKnown RBP18.48■□□□□ 0.55
RCCD1-207ENST00000556774 ARHGAP1Q07960 439 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 LY6KQ17RY6 165 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 GDF6Q6KF10 455 aaPredicted RBP18.48■□□□□ 0.55
RCCD1-207ENST00000556774 SEPT14Q6ZU15 432 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 ESR2Q92731 530 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 CRBNQ96SW2 442 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 RNF41Q9H4P4 317 aaPredicted RBP18.48■□□□□ 0.55
RCCD1-207ENST00000556774 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
RCCD1-207ENST00000556774 KIF28PB7ZC32 967 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 RBAK-RBAKDNI3L0D1 243 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 GH1P01241 217 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 KCNJ6P48051 423 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 CHST3Q7LGC8 479 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 TMCO2Q7Z6W1 182 aaPredicted RBP18.47■□□□□ 0.55
RCCD1-207ENST00000556774 RGS22Q8NE09 1264 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 CAGE1Q8TC20 777 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 SYTL5Q8TDW5 730 aaPredicted RBP18.47■□□□□ 0.55
RCCD1-207ENST00000556774 AFAP1L1Q8TED9 768 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 DHX38Q92620 1227 aaKnown RBP18.47■□□□□ 0.55
RCCD1-207ENST00000556774 TAAR1Q96RJ0 339 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 ABCB11O95342 1321 aa18.47■□□□□ 0.55
RCCD1-207ENST00000556774 SIP14410 1827 aa18.46■□□□□ 0.55
RCCD1-207ENST00000556774 LCHNA4D1U4 455 aa18.46■□□□□ 0.55
RCCD1-207ENST00000556774 TLL1O43897 1013 aa18.46■□□□□ 0.55
RCCD1-207ENST00000556774 WDR5P61964 334 aaKnown RBP18.46■□□□□ 0.55
RCCD1-207ENST00000556774 GRB10Q13322 594 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms