RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 COL26A1Q96A83 441 aa13.93□□□□□ -0.18
RBFOX1-214ENST00000552089 NOL10Q9BSC4 688 aaKnown RBP13.93□□□□□ -0.18
RBFOX1-214ENST00000552089 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
RBFOX1-214ENST00000552089 DHX16O60231 1041 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 BAG3O95817 575 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 HSPD1P10809 573 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 ADD2P35612 726 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 PPP4CP60510 307 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 KCTD2Q14681 263 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 ALX1Q15699 326 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 AGXT2Q9BYV1 514 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 ACACBO00763 2458 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
RBFOX1-214ENST00000552089 FLT1P17948 1338 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 KDM4AO75164 1064 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 EVCP57679 992 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 ADSSL1Q8N142 457 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 DMXL1Q9Y485 3027 aa13.91□□□□□ -0.18
RBFOX1-214ENST00000552089 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 SLC25A27O95847 323 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 HLA-DOAP06340 250 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 BEX3Q00994 111 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 ATG4CQ96DT6 458 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 PABPC5Q96DU9 382 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 ZNF274Q96GC6 653 aaPredicted RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 TGS1Q96RS0 853 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 DNAH14Q0VDD8 3507 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 GRIN2DO15399 1336 aa13.9□□□□□ -0.18
RBFOX1-214ENST00000552089 CTAGE5O15320 804 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 STX6O43752 255 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 CYP21A2P08686 494 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 PLCG2P16885 1265 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 AVPR2P30518 371 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 DSG3P32926 999 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 NBL1P41271 181 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 ERVK-21P61565 698 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 ADCK5Q3MIX3 580 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 RMDN1Q96DB5 314 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 ARMT1Q9H993 441 aa13.9□□□□□ -0.19
RBFOX1-214ENST00000552089 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 CABYRO75952 493 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 MBD4O95243 580 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 PCP11498 1178 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 KCNJ6P48051 423 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 ZXDAP98168 799 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 TRDNQ13061 729 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 MSL3Q8N5Y2 521 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 TMEM87AQ8NBN3 555 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 ZBED2Q9BTP6 218 aa13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 FTOQ9C0B1 505 aaKnown RBP eCLIP13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-214ENST00000552089 WDR87Q6ZQQ6 2873 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 ZNF213O14771 459 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 PRKAB2O43741 272 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 FLOT1O75955 427 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 ZSCAN22P10073 491 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 CYP2C9P11712 490 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 FGD1P98174 961 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 EXOSC10Q01780 885 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 ACVR2BQ13705 512 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 TMEM132BQ14DG7 1078 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 SMAD2Q15796 467 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 ABCB5Q2M3G0 1257 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 DDX49Q9Y6V7 483 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-214ENST00000552089 MYH7P12883 1935 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 LINC01553A4QN01 128 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 MCM5P33992 734 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 RFC2P35250 354 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 USP5P45974 858 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 CLUL1Q15846 466 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 TATDN1Q6P1N9 297 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 NCOA7Q8NI08 942 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 OSBP2Q969R2 916 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 MRPL38Q96DV4 380 aaKnown RBP13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 SEC62Q99442 399 aaKnown RBP13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
RBFOX1-214ENST00000552089 CNNM2Q9H8M5 875 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms