RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 KPNA6O60684 536 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 ARIH2O95376 493 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 PTPN11Q06124 597 aaPredicted RBP25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 GPNMBQ14956 572 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 PPP2R5BQ15173 497 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 RRP12Q5JTH9 1297 aaKnown RBP25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 SPRED2Q7Z698 418 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 SCFD2Q8WU76 684 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 ARNTL2Q8WYA1 636 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 FTOQ9C0B1 505 aaKnown RBP eCLIP25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 TOMM22Q9NS69 142 aa25.5■■□□□ 1.67
SMARCD1-212ENST00000551966 GTPBP6O43824 516 aaPredicted RBP25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 TXNP10599 105 aaKnown RBP25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 BRDTQ58F21 947 aaPredicted RBP25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 DNERQ8NFT8 737 aa25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 CTAGE1Q96RT6 745 aa25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 HELLSQ9NRZ9 838 aa25.49■■□□□ 1.67
SMARCD1-212ENST00000551966 TRANK1O15050 2925 aa25.48■■□□□ 1.67
SMARCD1-212ENST00000551966 TLL1O43897 1013 aa25.48■■□□□ 1.67
SMARCD1-212ENST00000551966 ZNF543Q08ER8 600 aa25.48■■□□□ 1.67
SMARCD1-212ENST00000551966 TET1Q8NFU7 2136 aa25.48■■□□□ 1.67
SMARCD1-212ENST00000551966 NCOR1O75376 2440 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 SNHG28P0DPA3 235 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 PLA2G5P39877 138 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 CCDC62Q6P9F0 684 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 TBC1D5Q92609 795 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 EVI5LQ96CN4 794 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 FAM227BQ96M60 508 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 C1QTNF1Q9BXJ1 281 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 EPHX3Q9H6B9 360 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 BDP1A6H8Y1 2624 aa25.47■■□□□ 1.67
SMARCD1-212ENST00000551966 WDR19Q8NEZ3 1342 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 RAD50Q92878 1312 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 RBAK-RBAKDNI3L0D1 243 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 LPXNO60711 386 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 GRB10Q13322 594 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 BFSP2Q13515 415 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 COG5Q9UP83 839 aa25.46■■□□□ 1.67
SMARCD1-212ENST00000551966 KIF28PB7ZC32 967 aa25.45■■□□□ 1.66
SMARCD1-212ENST00000551966 PTGISQ16647 500 aa25.45■■□□□ 1.66
SMARCD1-212ENST00000551966 TMCO2Q7Z6W1 182 aaPredicted RBP25.45■■□□□ 1.66
SMARCD1-212ENST00000551966 TTC14Q96N46 770 aa25.45■■□□□ 1.66
SMARCD1-212ENST00000551966 PNMA2Q9UL42 364 aa25.45■■□□□ 1.66
SMARCD1-212ENST00000551966 A0A0D9SFI3 127 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 LCHNA4D1U4 455 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 HSPD1P10809 573 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 CHMP4BP1P59074 171 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 GDF6Q6KF10 455 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 RGS22Q8NE09 1264 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 AFG1LQ8WV93 481 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 KAT2BQ92831 832 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 MPHOSPH6Q99547 160 aaKnown RBP25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 CPVLQ9H3G5 476 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 NOD1Q9Y239 953 aa25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 TRIP12Q14669 1992 aaPredicted RBP25.44■■□□□ 1.66
SMARCD1-212ENST00000551966 BAIAP3O94812 1187 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 GOLGA8HP0CJ92 632 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 HAND2P61296 217 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 LY6KQ17RY6 165 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 TCTN1Q2MV58 587 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 USH1GQ495M9 461 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 MCMDC2Q4G0Z9 681 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 DHX38Q92620 1227 aaKnown RBP25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 FAM122AQ96E09 287 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 UBA5Q9GZZ9 404 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 PTPRSQ13332 1948 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 TANC1Q9C0D5 1861 aa25.43■■□□□ 1.66
SMARCD1-212ENST00000551966 WDR5P61964 334 aaKnown RBP25.42■■□□□ 1.66
SMARCD1-212ENST00000551966 ZNF589Q86UQ0 364 aaPredicted RBP25.42■■□□□ 1.66
SMARCD1-212ENST00000551966 SESTD1Q86VW0 696 aa25.42■■□□□ 1.66
SMARCD1-212ENST00000551966 HLA-CQ95604 372 aa25.42■■□□□ 1.66
SMARCD1-212ENST00000551966 TAAR1Q96RJ0 339 aa25.42■■□□□ 1.66
SMARCD1-212ENST00000551966 B4DLN1 442 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 MMP3P08254 477 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 MRPL12P52815 198 aaKnown RBP25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 ARHGAP1Q07960 439 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 ANKRD45Q5TZF3 282 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 CAGE1Q8TC20 777 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 AFAP1L1Q8TED9 768 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 KHSRPQ92945 711 aaKnown RBP eCLIP25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 LRFN3Q9BTN0 628 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 COL20A1Q9P218 1284 aa25.41■■□□□ 1.66
SMARCD1-212ENST00000551966 KCNJ6P48051 423 aa25.4■■□□□ 1.66
SMARCD1-212ENST00000551966 PDE1AP54750 535 aa25.4■■□□□ 1.66
SMARCD1-212ENST00000551966 DEFB103AP81534 67 aa25.4■■□□□ 1.66
SMARCD1-212ENST00000551966 SEPT14Q6ZU15 432 aa25.4■■□□□ 1.66
SMARCD1-212ENST00000551966 NBNO60934 754 aa25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 SELPP16109 830 aa25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 NMIQ13287 307 aaPredicted RBP25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 MFSD6Q6ZSS7 791 aa25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 TBC1D10CQ8IV04 446 aa25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 SYTL5Q8TDW5 730 aaPredicted RBP25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 ZKSCAN3Q9BRR0 538 aa25.39■■□□□ 1.66
SMARCD1-212ENST00000551966 ZMYM6O95789 1325 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 GH1P01241 217 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 CXCL10P02778 98 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 RBL2Q08999 1139 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 GPATCH4Q5T3I0 446 aaKnown RBP25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 LRRC8DQ7L1W4 858 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 CHST3Q7LGC8 479 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms