RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 DEFB128Q7Z7B8 93 aa14.8□□□□□ -0.04
LETMD1-222ENST00000550274 TBC1D10CQ8IV04 446 aa14.8□□□□□ -0.04
LETMD1-222ENST00000550274 MTG1Q9BT17 334 aaPredicted RBP14.8□□□□□ -0.04
LETMD1-222ENST00000550274 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
LETMD1-222ENST00000550274 ARIH2O95376 493 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 SUPT20HL2P0C7V6 817 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 ATP2A2P16615 1042 aaKnown RBP14.79□□□□□ -0.04
LETMD1-222ENST00000550274 RRP1P56182 461 aaKnown RBP14.79□□□□□ -0.04
LETMD1-222ENST00000550274 PDE4DQ08499 809 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 CCDC171Q6TFL3 1326 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 ADAMTS19Q8TE59 1207 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 CPVLQ9H3G5 476 aa14.79□□□□□ -0.04
LETMD1-222ENST00000550274 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
LETMD1-222ENST00000550274 NEDD4P46934 1319 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 A6NJR5 290 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 PFKMP08237 780 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 MRPS5P82675 430 aaKnown RBP14.78□□□□□ -0.04
LETMD1-222ENST00000550274 USH1GQ495M9 461 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 DNERQ8NFT8 737 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 SCFD2Q8WU76 684 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 TTC14Q96N46 770 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
LETMD1-222ENST00000550274 GPHNQ9NQX3 736 aaPredicted RBP14.78□□□□□ -0.04
LETMD1-222ENST00000550274 BAZ2BQ9UIF8 2168 aaKnown RBP14.77□□□□□ -0.04
LETMD1-222ENST00000550274 RAD50Q92878 1312 aa14.77□□□□□ -0.04
LETMD1-222ENST00000550274 RFXAPO00287 272 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.05
LETMD1-222ENST00000550274 CA3P07451 260 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 TXNP10599 105 aaKnown RBP14.77□□□□□ -0.05
LETMD1-222ENST00000550274 NFRKBQ6P4R8 1299 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 MFSD6Q6ZSS7 791 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 PNMA2Q9UL42 364 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 DOCK5Q9H7D0 1870 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 SIP14410 1827 aa14.77□□□□□ -0.05
LETMD1-222ENST00000550274 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 PITPNM1O00562 1244 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 ARHGEF15O94989 841 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 IQCF3P0C7M6 154 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
LETMD1-222ENST00000550274 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
LETMD1-222ENST00000550274 BRDTQ58F21 947 aaPredicted RBP14.76□□□□□ -0.05
LETMD1-222ENST00000550274 TMEM67Q5HYA8 995 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 TBC1D5Q92609 795 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 UHRF1Q96T88 793 aaPredicted RBP14.76□□□□□ -0.05
LETMD1-222ENST00000550274 MPHOSPH6Q99547 160 aaKnown RBP14.76□□□□□ -0.05
LETMD1-222ENST00000550274 LNPKQ9C0E8 428 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 UBA5Q9GZZ9 404 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 CERS4Q9HA82 394 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 MICAL3Q7RTP6 2002 aa14.76□□□□□ -0.05
LETMD1-222ENST00000550274 EPOPA6NHQ4 379 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 KPNA6O60684 536 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 ACTN1P12814 892 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 RFC2P35250 354 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 CHMP4BP1P59074 171 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
LETMD1-222ENST00000550274 TFF2Q03403 129 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 CDC37Q16543 378 aaPredicted RBP14.75□□□□□ -0.05
LETMD1-222ENST00000550274 GPATCH4Q5T3I0 446 aaKnown RBP14.75□□□□□ -0.05
LETMD1-222ENST00000550274 CCDC62Q6P9F0 684 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 TICAM2Q86XR7 235 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 NECAB3Q96P71 396 aaPredicted RBP14.75□□□□□ -0.05
LETMD1-222ENST00000550274 CTAGE1Q96RT6 745 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 SLC9A7Q96T83 725 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 COL20A1Q9P218 1284 aa14.75□□□□□ -0.05
LETMD1-222ENST00000550274 RBAK-RBAKDNI3L0D1 243 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 MMP3P08254 477 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 COL9A1P20849 921 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 PTPN11Q06124 597 aaPredicted RBP14.74□□□□□ -0.05
LETMD1-222ENST00000550274 ARHGAP1Q07960 439 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 KRT40Q6A162 431 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 PNMA1Q8ND90 353 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 RGS22Q8NE09 1264 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 SYTL5Q8TDW5 730 aaPredicted RBP14.74□□□□□ -0.05
LETMD1-222ENST00000550274 AFG1LQ8WV93 481 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 ESR2Q92731 530 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 TAAR1Q96RJ0 339 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 RNF41Q9H4P4 317 aaPredicted RBP14.74□□□□□ -0.05
LETMD1-222ENST00000550274 RAPGEFL1Q9UHV5 662 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 MTCH2Q9Y6C9 303 aa14.74□□□□□ -0.05
LETMD1-222ENST00000550274 KDM4AO75164 1064 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 SDSP20132 328 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 TAP1Q03518 808 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 BFSP2Q13515 415 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 PTGISQ16647 500 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 LY6KQ17RY6 165 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 GDF6Q6KF10 455 aaPredicted RBP14.73□□□□□ -0.05
LETMD1-222ENST00000550274 SEPT14Q6ZU15 432 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 SPRED2Q7Z698 418 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 DGKHQ86XP1 1220 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 HERC6Q8IVU3 1022 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 ADGRF4Q8IZF3 695 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 RETREG2Q8NC44 543 aa14.73□□□□□ -0.05
LETMD1-222ENST00000550274 PHOSPHO2Q8TCD6 241 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms