RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 FAM47CQ5HY64 1035 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 TMEM240Q5SV17 173 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 ZNF365Q70YC5 407 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 CATIPQ7Z7H3 387 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
GCN1-205ENST00000548821 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
GCN1-205ENST00000548821 NCOA7Q8NI08 942 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 GUCD1Q96NT3 240 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.21□□□□□ -0.61
GCN1-205ENST00000548821 MTA3Q9BTC8 594 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 ZNF576Q9H609 170 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 PDGFCQ9NRA1 345 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 NEDD4P46934 1319 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 ZBTB5O15062 677 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 ADCY6O43306 1168 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 STAM2O75886 525 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 KIF5BP33176 963 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 CYP2C18P33260 490 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 DGKDQ16760 1214 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 TTC22Q5TAA0 569 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 LZTS2Q9BRK4 669 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
GCN1-205ENST00000548821 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 ASTN1O14525 1302 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
GCN1-205ENST00000548821 B4GALT4O60513 344 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 CFBP00751 764 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 GNAQP50148 359 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 WTAPQ15007 396 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 CASC1Q6TDU7 716 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 CAGE1Q8TC20 777 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 MAP3K14Q99558 947 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 NOC4LQ9BVI4 516 aaKnown RBP11.19□□□□□ -0.62
GCN1-205ENST00000548821 TRPV6Q9H1D0 765 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
GCN1-205ENST00000548821 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 MRVI1Q9Y6F6 885 aa11.19□□□□□ -0.62
GCN1-205ENST00000548821 DNAH12Q6ZR08 3092 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 ZBBXA8MT70 800 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
GCN1-205ENST00000548821 EFCAB14O75071 495 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 PPFIA4O75335 1185 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 NR3C2P08235 984 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 CALM1P0DP23 149 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 CALM2P0DP24 149 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 CALM3P0DP25 149 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 EPHB4P54760 987 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 CCL23P55773 120 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
GCN1-205ENST00000548821 C7orf31Q8N865 590 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 IL27Q8NEV9 243 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
GCN1-205ENST00000548821 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
GCN1-205ENST00000548821 CUL5Q93034 780 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 EMID1Q96A84 441 aaPredicted RBP11.18□□□□□ -0.62
GCN1-205ENST00000548821 FTOQ9C0B1 505 aaKnown RBP eCLIP11.18□□□□□ -0.62
GCN1-205ENST00000548821 JMJD4Q9H9V9 463 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 PCDHA11Q9Y5I1 949 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 SZT2Q5T011 3432 aa11.18□□□□□ -0.62
GCN1-205ENST00000548821 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
GCN1-205ENST00000548821 BAIAP3O94812 1187 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 ACRP10323 421 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 SMARCA1P28370 1054 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 CCND2P30279 289 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
GCN1-205ENST00000548821 PSMC6P62333 389 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 STOX1Q6ZVD7 989 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 SESTD1Q86VW0 696 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 GIMAP8Q8ND71 665 aaPredicted RBP11.17□□□□□ -0.62
GCN1-205ENST00000548821 AFAP1L1Q8TED9 768 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 MYLIPQ8WY64 445 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
GCN1-205ENST00000548821 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
GCN1-205ENST00000548821 SEC63Q9UGP8 760 aaKnown RBP11.17□□□□□ -0.62
GCN1-205ENST00000548821 GRIN2DO15399 1336 aa11.16□□□□□ -0.62
GCN1-205ENST00000548821 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
GCN1-205ENST00000548821 GNAT1P11488 350 aa11.16□□□□□ -0.62
GCN1-205ENST00000548821 ATP2A2P16615 1042 aaKnown RBP11.16□□□□□ -0.62
GCN1-205ENST00000548821 CHMLP26374 656 aa11.16□□□□□ -0.62
GCN1-205ENST00000548821 KCNJ6P48051 423 aa11.16□□□□□ -0.62
GCN1-205ENST00000548821 HSD17B4P51659 736 aa11.16□□□□□ -0.62
GCN1-205ENST00000548821 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms