RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 TRIM32Q13049 653 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 TAAR1Q96RJ0 339 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 ZMYND12Q9H0C1 365 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 ABHD16BQ9H3Z7 469 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 C6orf50Q9HD87 102 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 PXMP2Q9NR77 195 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 FRMPD4Q14CM0 1322 aa13.07□□□□□ -0.32
CALCOCO1-208ENST00000547988 SNAI1O95863 264 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 CCL5P13501 91 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 EDNRBP24530 442 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 ARHGEF16Q5VV41 709 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 PAK6Q9NQU5 681 aaPredicted RBP13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
CALCOCO1-208ENST00000547988 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 JAK2O60674 1132 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 MSCO60682 206 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 FDPSP14324 419 aaKnown RBP13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 PDE4DQ08499 809 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 AP3B2Q13367 1082 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 ACVR2BQ13705 512 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 MTFR1Q15390 333 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 UBE2SQ16763 222 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 PDCD2LQ9BRP1 358 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 KATNBL1Q9H079 304 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 RNF208Q9H0X6 261 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 EHMT1Q9H9B1 1298 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 VTA1Q9NP79 307 aa13.05□□□□□ -0.32
CALCOCO1-208ENST00000547988 MYH15Q9Y2K3 1946 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 SEPT4O43236 478 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 NR3C2P08235 984 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 ZNF865P0CJ78 1059 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 CAPN2P17655 700 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 CLK2P49760 499 aaKnown RBP13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 NLRP5P59047 1200 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 PGM5Q15124 567 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 STXBP2Q15833 593 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 PRAMEF19Q5SWL8 479 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 REXO1Q8N1G1 1221 aaKnown RBP13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 DAGLBQ8NCG7 672 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 TRPV1Q8NER1 839 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 SNX21Q969T3 373 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 SHISA4Q96DD7 197 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 AIFM3Q96NN9 605 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
CALCOCO1-208ENST00000547988 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 STAM2O75886 525 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 GJB1P08034 283 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 AKR1A1P14550 325 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 CNGA1P29973 690 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 CCND2P30279 289 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 XRRA1Q6P2D8 792 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 PHF20Q9BVI0 1012 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 DDX20Q9UHI6 824 aaKnown RBP13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 PCDHA6Q9UN73 950 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 PCDHA8Q9Y5H6 950 aa13.03□□□□□ -0.32
CALCOCO1-208ENST00000547988 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
CALCOCO1-208ENST00000547988 CCDC85CA6NKD9 419 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 CUL4AQ13619 759 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 TRIM29Q14134 588 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 DEFB118Q96PH6 123 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 ANO3Q9BYT9 981 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 FAM184BQ9ULE4 1060 aa13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.33
CALCOCO1-208ENST00000547988 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 DTNBO60941 627 aa13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 SGPL1O95470 568 aa13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 RARBP10826 455 aa13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 MYCLP12524 364 aaPredicted RBP13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 SREBF1P36956 1147 aa13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 GJA8P48165 433 aa13.01□□□□□ -0.33
CALCOCO1-208ENST00000547988 NPY5RQ15761 445 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms