RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
USP15-206ENST00000546718 TET1Q8NFU7 2136 aa17.06■□□□□ 0.32
USP15-206ENST00000546718 IQCF3P0C7M6 154 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 PDHBP11177 359 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
USP15-206ENST00000546718 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
USP15-206ENST00000546718 PDE4DQ08499 809 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
USP15-206ENST00000546718 RNF207Q6ZRF8 634 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 HERC6Q8IVU3 1022 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 CTAGE1Q96RT6 745 aa17.05■□□□□ 0.32
USP15-206ENST00000546718 GPHNQ9NQX3 736 aaPredicted RBP17.05■□□□□ 0.32
USP15-206ENST00000546718 RAD50Q92878 1312 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 NKRFO15226 690 aaKnown RBP eCLIP17.04■□□□□ 0.32
USP15-206ENST00000546718 ARIH2O95376 493 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 ACTN1P12814 892 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 PLA2G5P39877 138 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 ALX1Q15699 326 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 PHOSPHO2Q8TCD6 241 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 TOMM22Q9NS69 142 aa17.04■□□□□ 0.32
USP15-206ENST00000546718 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
USP15-206ENST00000546718 SNHG28P0DPA3 235 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
USP15-206ENST00000546718 DNERQ8NFT8 737 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 ARNTL2Q8WYA1 636 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 TCP11L1Q9NUJ3 509 aa17.03■□□□□ 0.32
USP15-206ENST00000546718 RBAK-RBAKDNI3L0D1 243 aa17.02■□□□□ 0.32
USP15-206ENST00000546718 LPXNO60711 386 aa17.02■□□□□ 0.32
USP15-206ENST00000546718 FGAP02671 866 aa17.02■□□□□ 0.32
USP15-206ENST00000546718 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
USP15-206ENST00000546718 PTPN11Q06124 597 aaPredicted RBP17.02■□□□□ 0.32
USP15-206ENST00000546718 GPNMBQ14956 572 aa17.02■□□□□ 0.32
USP15-206ENST00000546718 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
USP15-206ENST00000546718 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.32
USP15-206ENST00000546718 ZMYM6O95789 1325 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 KPNA6O60684 536 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 BAIAP3O94812 1187 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 GRB10Q13322 594 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 BFSP2Q13515 415 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 CCDC62Q6P9F0 684 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 TMCO2Q7Z6W1 182 aaPredicted RBP17.01■□□□□ 0.31
USP15-206ENST00000546718 ZNF589Q86UQ0 364 aaPredicted RBP17.01■□□□□ 0.31
USP15-206ENST00000546718 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 C1QTNF1Q9BXJ1 281 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
USP15-206ENST00000546718 TLL1O43897 1013 aa17■□□□□ 0.31
USP15-206ENST00000546718 CHMP4BP1P59074 171 aa17■□□□□ 0.31
USP15-206ENST00000546718 HAND2P61296 217 aa17■□□□□ 0.31
USP15-206ENST00000546718 WDR5P61964 334 aaKnown RBP17■□□□□ 0.31
USP15-206ENST00000546718 PTGISQ16647 500 aa17■□□□□ 0.31
USP15-206ENST00000546718 USH1GQ495M9 461 aa17■□□□□ 0.31
USP15-206ENST00000546718 GDF6Q6KF10 455 aaPredicted RBP17■□□□□ 0.31
USP15-206ENST00000546718 TBC1D10CQ8IV04 446 aa17■□□□□ 0.31
USP15-206ENST00000546718 AFG1LQ8WV93 481 aa17■□□□□ 0.31
USP15-206ENST00000546718 DHX38Q92620 1227 aaKnown RBP17■□□□□ 0.31
USP15-206ENST00000546718 MPHOSPH6Q99547 160 aaKnown RBP17■□□□□ 0.31
USP15-206ENST00000546718 CPVLQ9H3G5 476 aa17■□□□□ 0.31
USP15-206ENST00000546718 BRWD1Q9NSI6 2320 aa17■□□□□ 0.31
USP15-206ENST00000546718 PNMA2Q9UL42 364 aa17■□□□□ 0.31
USP15-206ENST00000546718 COG5Q9UP83 839 aa17■□□□□ 0.31
USP15-206ENST00000546718 NOD1Q9Y239 953 aa17■□□□□ 0.31
USP15-206ENST00000546718 TRIP12Q14669 1992 aaPredicted RBP17■□□□□ 0.31
USP15-206ENST00000546718 MMP3P08254 477 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 GOLGA8HP0CJ92 632 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 HSPD1P10809 573 aaKnown RBP16.99■□□□□ 0.31
USP15-206ENST00000546718 DEFB103AP81534 67 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 ARHGAP1Q07960 439 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 CAGE1Q8TC20 777 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 AFAP1L1Q8TED9 768 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 KAT2BQ92831 832 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 COL20A1Q9P218 1284 aa16.99■□□□□ 0.31
USP15-206ENST00000546718 NEDD4P46934 1319 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 LY6KQ17RY6 165 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 GDPD5Q8WTR4 605 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 TBC1D5Q92609 795 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.313e-7■■■■□ 19.5
USP15-206ENST00000546718 HLA-CQ95604 372 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 FAM122AQ96E09 287 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 TTC14Q96N46 770 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 EPHX3Q9H6B9 360 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 TRIOO75962 3097 aa16.98■□□□□ 0.31
USP15-206ENST00000546718 C5orf42Q9H799 3197 aa16.97■□□□□ 0.31
USP15-206ENST00000546718 NBNO60934 754 aa16.97■□□□□ 0.31
USP15-206ENST00000546718 SELPP16109 830 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms