RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SH3GLB2Q9NR46 395 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 FOXD4L1Q9NU39 408 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 FLRT1Q9NZU1 646 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 CCDC85CA6NKD9 419 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 H3BQV1 296 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 OPLAHO14841 1288 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 FOSP01100 380 aaPredicted RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 MYCNP04198 464 aaPredicted RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 GJB2P29033 226 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 CCND2P30279 289 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 ZNF76P36508 570 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 GUCY1B3Q02153 619 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 TRIM32Q13049 653 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 BECN1Q14457 450 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 STXBP2Q15833 593 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 PRAMEF19Q5SWL8 479 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 IFFO2Q5TF58 517 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 MCTP2Q6DN12 878 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 TYW1BQ6NUM6 668 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 REXO1Q8N1G1 1221 aaKnown RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 MSL3Q8N5Y2 521 aaKnown RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 SNX21Q969T3 373 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 PGBD1Q96JS3 809 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 C8orf76Q96K31 380 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 IWS1Q96ST2 819 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 ZMYND12Q9H0C1 365 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 ABHD16BQ9H3Z7 469 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 PXMP2Q9NR77 195 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 TMEM260Q9NX78 707 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
LTBR-212ENST00000543542 PCDHA6Q9UN73 950 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 KCNJ14Q9UNX9 436 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 PCDHA8Q9Y5H6 950 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 RPTORQ8N122 1335 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 SYNGAP1Q96PV0 1343 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 LCTP09848 1927 aa7.23□□□□□ -1.25
LTBR-212ENST00000543542 LOC102724159A0A0B4J2E5 919 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 CCDC194A0A1B0GVG4 234 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 ESYT2A0FGR8 921 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 PIK3CDO00329 1044 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 MEIS2O14770 477 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 NR3C2P08235 984 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 CCL5P13501 91 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 FDPSP14324 419 aaKnown RBP7.22□□□□□ -1.25
LTBR-212ENST00000543542 KRT2P35908 639 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 ST3GAL1Q11201 340 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 AP3B2Q13367 1082 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 ACVR2BQ13705 512 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 PGM5Q15124 567 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 PWP2Q15269 919 aaKnown RBP7.22□□□□□ -1.25
LTBR-212ENST00000543542 MTFR1Q15390 333 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 GALNT17Q6IS24 598 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 MAMDC4Q6UXC1 1216 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 SEPT14Q6ZU15 432 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 FBXO16Q8IX29 292 aaPredicted RBP7.22□□□□□ -1.25
LTBR-212ENST00000543542 BLIDQ8IZY5 108 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 FAM177A1Q8N128 213 aaPredicted RBP7.22□□□□□ -1.25
LTBR-212ENST00000543542 SPRYD3Q8NCJ5 442 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 ANO3Q9BYT9 981 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.22□□□□□ -1.254e-6■■■■□ 20.6
LTBR-212ENST00000543542 UNC93B1Q9H1C4 597 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 VTA1Q9NP79 307 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 GJB4Q9NTQ9 266 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 COL20A1Q9P218 1284 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 FAM184BQ9ULE4 1060 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 PCDHA4Q9UN74 947 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 DDX49Q9Y6V7 483 aaKnown RBP7.22□□□□□ -1.25
LTBR-212ENST00000543542 MCM3APO60318 1980 aa7.22□□□□□ -1.25
LTBR-212ENST00000543542 EIF3JO75822 258 aaKnown RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 SNAI1O95863 264 aaPredicted RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 AKR1A1P14550 325 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 CCND3P30281 292 aaPredicted RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 GHRHRQ02643 423 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 NONOQ15233 471 aaKnown RBP eCLIP7.21□□□□□ -1.26
LTBR-212ENST00000543542 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 ANO1Q5XXA6 986 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 KRT40Q6A162 431 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 MCTP1Q6DN14 999 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 KRT25Q7Z3Z0 450 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 NLRX1Q86UT6 975 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 TEX2Q8IWB9 1127 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 RASGRP4Q8TDF6 673 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 ARMC5Q96C12 935 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 ABHD8Q96I13 439 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 ZNF333Q96JL9 665 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 ZFP91Q96JP5 570 aaPredicted RBP7.21□□□□□ -1.26
LTBR-212ENST00000543542 FGD4Q96M96 766 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 DEFB118Q96PH6 123 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 PDCD2LQ9BRP1 358 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 SPC25Q9HBM1 224 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 RTEL1Q9NZ71 1219 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 NRBP1Q9UHY1 535 aa7.21□□□□□ -1.26
LTBR-212ENST00000543542 MRVI1Q9Y6F6 885 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms