RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 USP11P51784 963 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 ORC2Q13416 577 aaPredicted RBP12.14□□□□□ -0.47
DDB1-221ENST00000543162 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
DDB1-221ENST00000543162 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 ZIC5Q96T25 663 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
DDB1-221ENST00000543162 LMBRD1Q9NUN5 540 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 CYP39A1Q9NYL5 469 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 COL20A1Q9P218 1284 aa12.14□□□□□ -0.47
DDB1-221ENST00000543162 AOC2O75106 756 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 PPP6R2O75170 966 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
DDB1-221ENST00000543162 PTGDRQ13258 359 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 PPP4R3AQ6IN85 833 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
DDB1-221ENST00000543162 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
DDB1-221ENST00000543162 RPTORQ8N122 1335 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 ADGRA2Q96PE1 1338 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 EDIL3O43854 480 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 NEMFO60524 1076 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 TDP2O95551 362 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 CYP3A4P08684 503 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 FCER1AP12319 257 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 ZNF76P36508 570 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 UBE2HP62256 183 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 UBXN2AP68543 259 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 ATP2C1P98194 919 aaPredicted RBP12.12□□□□□ -0.47
DDB1-221ENST00000543162 KCTD2Q14681 263 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 TPRNQ4KMQ1 711 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 ARHGEF16Q5VV41 709 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 MOXD1Q6UVY6 613 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDB1-221ENST00000543162 KRI1Q8N9T8 703 aaKnown RBP12.12□□□□□ -0.47
DDB1-221ENST00000543162 MMP19Q99542 508 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 PORCNQ9H237 461 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 EFCC1Q9HA90 598 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 DDX25Q9UHL0 483 aaKnown RBP12.12□□□□□ -0.47
DDB1-221ENST00000543162 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
DDB1-221ENST00000543162 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
DDB1-221ENST00000543162 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 CYP3A7-CYP3A51PA0A087WV96 503 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 LAD1O00515 517 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 CA12O43570 354 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 TLR2O60603 784 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
DDB1-221ENST00000543162 BCRP11274 1271 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
DDB1-221ENST00000543162 CYP3A7P24462 503 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 CIITAP33076 1130 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 CRHR2Q13324 411 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 NSUN6Q8TEA1 469 aaKnown RBP12.11□□□□□ -0.47
DDB1-221ENST00000543162 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
DDB1-221ENST00000543162 R3HDMLQ9H3Y0 253 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 FBXO2Q9UK22 296 aaPredicted RBP12.11□□□□□ -0.47
DDB1-221ENST00000543162 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 IVNS1ABPQ9Y6Y0 642 aa12.11□□□□□ -0.47
DDB1-221ENST00000543162 SLC37A4O43826 429 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 MARCH6O60337 910 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 CUTAO60888 179 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PTPREP23469 700 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 MAPK4P31152 587 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 MAP2K2P36507 400 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PRPHP41219 470 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 VEGFBP49765 207 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 HTRA3P83110 453 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PGM5Q15124 567 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 CALCRLQ16602 461 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PRR16Q569H4 304 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PCNX4Q63HM2 1172 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 ARL6IP4Q66PJ3 421 aaKnown RBP12.1□□□□□ -0.47
DDB1-221ENST00000543162 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 XRRA1Q6P2D8 792 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 C17orf99Q6UX52 265 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 IL31RAQ8NI17 732 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
DDB1-221ENST00000543162 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
DDB1-221ENST00000543162 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
DDB1-221ENST00000543162 A0A1W2PQ27 194 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 A0A1W2PQ64 194 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 A0A1W2PQD8 194 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 FAM86B1E9PN63 330 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 STRNO43815 780 aa12.09□□□□□ -0.47
DDB1-221ENST00000543162 MBD3O95983 291 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 390.1 ms