RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MAP3K21Q5TCX8 1036 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 ARMCX2Q7L311 632 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
DDB1-218ENST00000540784 BICD2Q8TD16 824 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 AIFM3Q96NN9 605 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 ALG1Q9BT22 464 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 PXMP2Q9NR77 195 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 NRBP1Q9UHY1 535 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 ZNF236Q9UL36 1845 aa17.79■□□□□ 0.44
DDB1-218ENST00000540784 ESYT2A0FGR8 921 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 SPDYE3A6NKU9 549 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 FOSP01100 380 aaPredicted RBP17.78■□□□□ 0.44
DDB1-218ENST00000540784 CCL5P13501 91 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 EIF2AK2P19525 551 aaKnown RBP17.78■□□□□ 0.44
DDB1-218ENST00000540784 CNGA1P29973 690 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
DDB1-218ENST00000540784 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 MTFR1Q15390 333 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 UBE2SQ16763 222 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 SNX21Q969T3 373 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 TMEM106CQ9BVX2 250 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 UNC93B1Q9H1C4 597 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 ABHD16BQ9H3Z7 469 aa17.78■□□□□ 0.44
DDB1-218ENST00000540784 NR3C2P08235 984 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 STXBP2Q15833 593 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 MCTP2Q6DN12 878 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 GALNT17Q6IS24 598 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 PCDHA6Q9UN73 950 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 PCDHA8Q9Y5H6 950 aa17.77■□□□□ 0.44
DDB1-218ENST00000540784 MYCLP12524 364 aaPredicted RBP17.76■□□□□ 0.43
DDB1-218ENST00000540784 EDNRBP24530 442 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 CCND3P30281 292 aaPredicted RBP17.76■□□□□ 0.43
DDB1-218ENST00000540784 TRIM29Q14134 588 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 EEPD1Q7L9B9 569 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 TRPV1Q8NER1 839 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 PDCD2LQ9BRP1 358 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDB1-218ENST00000540784 EHMT1Q9H9B1 1298 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 ZHX1Q9UKY1 873 aaPredicted RBP17.76■□□□□ 0.43
DDB1-218ENST00000540784 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 KCNJ14Q9UNX9 436 aa17.76■□□□□ 0.43
DDB1-218ENST00000540784 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
DDB1-218ENST00000540784 DDX49Q9Y6V7 483 aaKnown RBP17.76■□□□□ 0.43
DDB1-218ENST00000540784 CCDC85CA6NKD9 419 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 EIF3JO75822 258 aaKnown RBP17.75■□□□□ 0.43
DDB1-218ENST00000540784 ZNF865P0CJ78 1059 aaPredicted RBP17.75■□□□□ 0.43
DDB1-218ENST00000540784 CYBAP13498 195 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 PGM5Q15124 567 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 VTA1Q9NP79 307 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 TMEM260Q9NX78 707 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
DDB1-218ENST00000540784 K7ELQ4 463 aaPredicted RBP17.74■□□□□ 0.43
DDB1-218ENST00000540784 SEPT4O43236 478 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 CCND2P30279 289 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 CLK2P49760 499 aaKnown RBP17.74■□□□□ 0.43
DDB1-218ENST00000540784 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 CUL4AQ13619 759 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 IQSEC1Q6DN90 963 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 HSCBQ8IWL3 235 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 REXO1Q8N1G1 1221 aaKnown RBP17.74■□□□□ 0.43
DDB1-218ENST00000540784 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
DDB1-218ENST00000540784 GJB1P08034 283 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 CCDC144BQ3MJ40 725 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 TAPT1Q6NXT6 567 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 XRRA1Q6P2D8 792 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 FBXO16Q8IX29 292 aaPredicted RBP17.73■□□□□ 0.43
DDB1-218ENST00000540784 DEFB118Q96PH6 123 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 KATNBL1Q9H079 304 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 PAK6Q9NQU5 681 aaPredicted RBP17.73■□□□□ 0.43
DDB1-218ENST00000540784 PDGFCQ9NRA1 345 aa17.73■□□□□ 0.43
DDB1-218ENST00000540784 DDX20Q9UHI6 824 aaKnown RBP17.73■□□□□ 0.43
DDB1-218ENST00000540784 PLXNA1Q9UIW2 1896 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 MSCO60682 206 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
DDB1-218ENST00000540784 AKR1A1P14550 325 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 FOSBP53539 338 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 PCNX4Q63HM2 1172 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 DAGLBQ8NCG7 672 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 C8orf76Q96K31 380 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 ANO3Q9BYT9 981 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 FRMPD4Q14CM0 1322 aa17.72■□□□□ 0.43
DDB1-218ENST00000540784 RBM47A0AV96 593 aaKnown RBP17.71■□□□□ 0.43
DDB1-218ENST00000540784 STAM2O75886 525 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 SGPL1O95470 568 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 GJB2P29033 226 aa17.71■□□□□ 0.43
DDB1-218ENST00000540784 TNFAIP2Q03169 654 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms