RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 LDHBP07195 334 aaKnown RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CACNA2D4Q7Z3S7 1137 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CERS3Q8IU89 383 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CCT5P48643 541 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CREG2Q8IUH2 290 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 NUP58Q9BVL2 599 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 NDST4Q9H3R1 872 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 XIRP1Q702N8 1843 aaKnown RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 ZSCAN5CA6NGD5 496 aaPredicted RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 MYMKA6NI61 221 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 MAGEA1P43355 309 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CCDC70Q6NSX1 233 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 DNAAF5Q86Y56 855 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 FAM76AQ8TAV0 307 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 CALML4Q96GE6 196 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 MMTAG2Q9BU76 263 aaKnown RBP17.69■□□□□ 0.42
CACFD1-206ENST00000540581 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
CACFD1-206ENST00000540581 RAD21O60216 631 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 TUBBP07437 444 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 NEK8Q86SG6 692 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 SPATA4Q8NEY3 305 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 TSPYL1Q9H0U9 437 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 TDP2O95551 362 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 VWA3BQ502W6 1294 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 AMOTL1Q8IY63 956 aa17.68■□□□□ 0.42
CACFD1-206ENST00000540581 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
CACFD1-206ENST00000540581 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
CACFD1-206ENST00000540581 ATP1A2P50993 1020 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SV2BQ7L1I2 683 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 CCDC170Q8IYT3 715 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SH2D3CQ8N5H7 860 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SEC63Q9UGP8 760 aaKnown RBP17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SAMM50Q9Y512 469 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 MCM3P25205 808 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SLC1A4P43007 532 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 GNAQP50148 359 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 TSEN2Q8NCE0 465 aaKnown RBP17.67■□□□□ 0.42
CACFD1-206ENST00000540581 EYA3Q99504 573 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACFD1-206ENST00000540581 ZHX3Q9H4I2 956 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
CACFD1-206ENST00000540581 MYH14Q7Z406 1995 aaKnown RBP17.67■□□□□ 0.42
CACFD1-206ENST00000540581 MYH10P35580 1976 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 FTCDO95954 541 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 CNNM4Q6P4Q7 775 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 TMED8Q6PL24 325 aaPredicted RBP17.66■□□□□ 0.42
CACFD1-206ENST00000540581 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
CACFD1-206ENST00000540581 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 EP400Q96L91 3159 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 USP17L5A8MUK1 530 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 SLC37A4O43826 429 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 MARCH6O60337 910 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 RASA1P20936 1047 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 TNNI2P48788 182 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 FAM182BQ5T319 152 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 KCNK18Q7Z418 384 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 TRIM58Q8NG06 486 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 JRKLQ9Y4A0 524 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 NHSL1Q5SYE7 1610 aa17.66■□□□□ 0.42
CACFD1-206ENST00000540581 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.42
CACFD1-206ENST00000540581 GUCY2FP51841 1108 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 PACS2Q86VP3 889 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 LRRC47Q8N1G4 583 aaKnown RBP17.65■□□□□ 0.42
CACFD1-206ENST00000540581 ARL8AQ96BM9 186 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 VIPAS39Q9H9C1 493 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 RBM12Q9NTZ6 932 aaKnown RBP17.65■□□□□ 0.42
CACFD1-206ENST00000540581 GNGT1P63211 74 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 AMPD3Q01432 767 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 GRB10Q13322 594 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 NFIXQ14938 502 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 CALCRLQ16602 461 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 RUFY1Q96T51 708 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 TARSL2A2RTX5 802 aaKnown RBP17.65■□□□□ 0.42
CACFD1-206ENST00000540581 PALM3A6NDB9 673 aaPredicted RBP17.65■□□□□ 0.42
CACFD1-206ENST00000540581 UBE2SQ16763 222 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 KRT25Q7Z3Z0 450 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 SNX29Q8TEQ0 813 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 C7orf25Q9BPX7 421 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 FAM184BQ9ULE4 1060 aa17.65■□□□□ 0.42
CACFD1-206ENST00000540581 CCDC40Q4G0X9 1142 aa17.64■□□□□ 0.41
CACFD1-206ENST00000540581 IQCEQ6IPM2 695 aa17.64■□□□□ 0.41
CACFD1-206ENST00000540581 REXO1Q8N1G1 1221 aaKnown RBP17.64■□□□□ 0.41
CACFD1-206ENST00000540581 MICALL1Q8N3F8 863 aa17.64■□□□□ 0.41
CACFD1-206ENST00000540581 RETREG2Q8NC44 543 aa17.64■□□□□ 0.41
CACFD1-206ENST00000540581 CEP95Q96GE4 821 aa17.64■□□□□ 0.41
CACFD1-206ENST00000540581 ALS2CR12Q96Q35 445 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms