RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 KAT6AQ92794 2004 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 TRIM6-TRIM34B2RNG4 842 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 PFKMP08237 780 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 ZNF543Q08ER8 600 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 MFSD6Q6ZSS7 791 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 SCFD2Q8WU76 684 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 TSPYL2Q9H2G4 693 aaPredicted RBP22.88■■□□□ 1.25
C1RL-207ENST00000539927 CERS4Q9HA82 394 aa22.88■■□□□ 1.25
C1RL-207ENST00000539927 NKRFO15226 690 aaKnown RBP eCLIP22.87■■□□□ 1.25
C1RL-207ENST00000539927 GOLGA8HP0CJ92 632 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 TXNP10599 105 aaKnown RBP22.87■■□□□ 1.25
C1RL-207ENST00000539927 ACTN1P12814 892 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 TMEM67Q5HYA8 995 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 ZKSCAN3Q9BRR0 538 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 FTOQ9C0B1 505 aaKnown RBP eCLIP22.87■■□□□ 1.25
C1RL-207ENST00000539927 CPVLQ9H3G5 476 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 DOCK5Q9H7D0 1870 aa22.87■■□□□ 1.25
C1RL-207ENST00000539927 CCDC171Q6TFL3 1326 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 RFXAPO00287 272 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 CA3P07451 260 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 RETREG2Q8NC44 543 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 DNERQ8NFT8 737 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 CRBNQ96SW2 442 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 UHRF1Q96T88 793 aaPredicted RBP22.86■■□□□ 1.25
C1RL-207ENST00000539927 PNMA2Q9UL42 364 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 NOD1Q9Y239 953 aa22.86■■□□□ 1.25
C1RL-207ENST00000539927 WDR19Q8NEZ3 1342 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 B4DLN1 442 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 COL9A1P20849 921 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 MRPL12P52815 198 aaKnown RBP22.85■■□□□ 1.25
C1RL-207ENST00000539927 SKIV2LQ15477 1246 aaKnown RBP22.85■■□□□ 1.25
C1RL-207ENST00000539927 NFRKBQ6P4R8 1299 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 TBC1D10CQ8IV04 446 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 TTC14Q96N46 770 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 UBA5Q9GZZ9 404 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 XIRP2A4UGR9 3374 aa22.85■■□□□ 1.25
C1RL-207ENST00000539927 ZMYM6O95789 1325 aa22.84■■□□□ 1.25
C1RL-207ENST00000539927 KPNA6O60684 536 aa22.84■■□□□ 1.25
C1RL-207ENST00000539927 ARIH2O95376 493 aa22.84■■□□□ 1.25
C1RL-207ENST00000539927 EDNRBP24530 442 aa22.84■■□□□ 1.25
C1RL-207ENST00000539927 RRP1P56182 461 aaKnown RBP22.84■■□□□ 1.25
C1RL-207ENST00000539927 SIP14410 1827 aa22.84■■□□□ 1.25
C1RL-207ENST00000539927 MICAL3Q7RTP6 2002 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 A6NJR5 290 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 IQCF3P0C7M6 154 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 SNHG28P0DPA3 235 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 RFC2P35250 354 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 TFF2Q03403 129 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 TBC1D5Q92609 795 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 SLC9A7Q96T83 725 aa22.83■■□□□ 1.25
C1RL-207ENST00000539927 NEDD4P46934 1319 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 PITPNM1O00562 1244 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 GTPBP6O43824 516 aaPredicted RBP22.82■■□□□ 1.24
C1RL-207ENST00000539927 BFSP2Q13515 415 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 GPATCH4Q5T3I0 446 aaKnown RBP22.82■■□□□ 1.24
C1RL-207ENST00000539927 SEPT14Q6ZU15 432 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 CHST3Q7LGC8 479 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 ESR2Q92731 530 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 NECAB3Q96P71 396 aaPredicted RBP22.82■■□□□ 1.24
C1RL-207ENST00000539927 LNPKQ9C0E8 428 aa22.82■■□□□ 1.24
C1RL-207ENST00000539927 RNF41Q9H4P4 317 aaPredicted RBP22.82■■□□□ 1.24
C1RL-207ENST00000539927 PCP11498 1178 aaKnown RBP22.81■■□□□ 1.24
C1RL-207ENST00000539927 PTPN11Q06124 597 aaPredicted RBP22.81■■□□□ 1.24
C1RL-207ENST00000539927 CDC37Q16543 378 aaPredicted RBP22.81■■□□□ 1.24
C1RL-207ENST00000539927 PTGISQ16647 500 aa22.81■■□□□ 1.24
C1RL-207ENST00000539927 KRT40Q6A162 431 aa22.81■■□□□ 1.24
C1RL-207ENST00000539927 AFG1LQ8WV93 481 aa22.81■■□□□ 1.24
C1RL-207ENST00000539927 ARNTL2Q8WYA1 636 aa22.81■■□□□ 1.24
C1RL-207ENST00000539927 YTHDC1Q96MU7 727 aaKnown RBP22.81■■□□□ 1.24
C1RL-207ENST00000539927 RAPGEFL1Q9UHV5 662 aa22.81■■□□□ 1.24
C1RL-207ENST00000539927 EPOPA6NHQ4 379 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 LY6KQ17RY6 165 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 PNMA1Q8ND90 353 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 TAAR1Q96RJ0 339 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 MTCH2Q9Y6C9 303 aa22.8■■□□□ 1.24
C1RL-207ENST00000539927 ZNF213O14771 459 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 DHX16O60231 1041 aaKnown RBP22.79■■□□□ 1.24
C1RL-207ENST00000539927 MMP3P08254 477 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 MFAP1P55081 439 aaKnown RBP22.79■■□□□ 1.24
C1RL-207ENST00000539927 HDAC1Q13547 482 aaPredicted RBP22.79■■□□□ 1.24
C1RL-207ENST00000539927 HERC6Q8IVU3 1022 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 KAT14Q9H8E8 782 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 NLRC5Q86WI3 1866 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 ABCB11O95342 1321 aa22.79■■□□□ 1.24
C1RL-207ENST00000539927 KDM4AO75164 1064 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 ARHGEF15O94989 841 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 GH1P01241 217 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 SDSP20132 328 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 KCNJ6P48051 423 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 KCNQ1P51787 676 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 GDF6Q6KF10 455 aaPredicted RBP22.78■■□□□ 1.24
C1RL-207ENST00000539927 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 CCDC62Q6P9F0 684 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 IQCA1Q86XH1 822 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 DGKHQ86XP1 1220 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 ADGRF4Q8IZF3 695 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 CCDC155Q8N6L0 562 aa22.78■■□□□ 1.24
C1RL-207ENST00000539927 RGS22Q8NE09 1264 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms