RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 RAG1P15918 1043 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 HSD17B4P51659 736 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 BEX3Q00994 111 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 FAAP100Q0VG06 881 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 TSGA10IPQ3SY00 556 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 ARHGEF16Q5VV41 709 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 NFXL1Q6ZNB6 911 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 ZNF654Q8IZM8 581 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 TBC1D5Q92609 795 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 TRIM43Q96BQ3 446 aaPredicted RBP24.89■■□□□ 1.58
CCDC78-215ENST00000538176 TAAR1Q96RJ0 339 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 SENP2Q9HC62 589 aa24.89■■□□□ 1.58
CCDC78-215ENST00000538176 KRT32Q14532 448 aa24.88■■□□□ 1.57
CCDC78-215ENST00000538176 HOMER1Q86YM7 354 aa24.88■■□□□ 1.57
CCDC78-215ENST00000538176 BADQ92934 168 aa24.88■■□□□ 1.57
CCDC78-215ENST00000538176 PIGSQ96S52 555 aa24.88■■□□□ 1.57
CCDC78-215ENST00000538176 GPHNQ9NQX3 736 aaPredicted RBP24.88■■□□□ 1.57
CCDC78-215ENST00000538176 DDX49Q9Y6V7 483 aaKnown RBP24.88■■□□□ 1.57
CCDC78-215ENST00000538176 LRRC37A2A6NM11 1700 aa24.87■■□□□ 1.57
CCDC78-215ENST00000538176 EIF3JO75822 258 aaKnown RBP24.87■■□□□ 1.57
CCDC78-215ENST00000538176 TXNP10599 105 aaKnown RBP24.87■■□□□ 1.57
CCDC78-215ENST00000538176 IRX5P78411 483 aaPredicted RBP24.87■■□□□ 1.57
CCDC78-215ENST00000538176 CXCL17Q6UXB2 119 aa24.87■■□□□ 1.57
CCDC78-215ENST00000538176 SH3RF1Q7Z6J0 888 aa24.87■■□□□ 1.57
CCDC78-215ENST00000538176 SLC43A3Q8NBI5 491 aa24.87■■□□□ 1.57
CCDC78-215ENST00000538176 SPZ1Q9BXG8 430 aa24.87■■□□□ 1.57
CCDC78-215ENST00000538176 SH2B2O14492 632 aaPredicted RBP24.86■■□□□ 1.57
CCDC78-215ENST00000538176 CYTH3O43739 400 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 ITGA7Q13683 1181 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 SYNE3Q6ZMZ3 975 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 OR6J1Q8NGC5 347 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 RRP36Q96EU6 259 aaKnown RBP24.86■■□□□ 1.57
CCDC78-215ENST00000538176 NEK1Q96PY6 1258 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 SLC12A7Q9Y666 1083 aa24.86■■□□□ 1.57
CCDC78-215ENST00000538176 GCOM1H8Y6P7 765 aaPredicted RBP24.85■■□□□ 1.57
CCDC78-215ENST00000538176 TIMP1P01033 207 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 HMGB1P09429 215 aaKnown RBP24.85■■□□□ 1.57
CCDC78-215ENST00000538176 POLR2MP0CAP2 368 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 KCNV1Q6PIU1 500 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 FAM126BQ8IXS8 530 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 PXMP2Q9NR77 195 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 COL20A1Q9P218 1284 aa24.85■■□□□ 1.57
CCDC78-215ENST00000538176 SEC63Q9UGP8 760 aaKnown RBP24.85■■□□□ 1.57
CCDC78-215ENST00000538176 A6NJR5 290 aa24.84■■□□□ 1.57
CCDC78-215ENST00000538176 PPP1R11O60927 126 aaPredicted RBP24.84■■□□□ 1.57
CCDC78-215ENST00000538176 NR3C2P08235 984 aa24.84■■□□□ 1.57
CCDC78-215ENST00000538176 SGMS1Q86VZ5 419 aa24.84■■□□□ 1.57
CCDC78-215ENST00000538176 TBX21Q9UL17 535 aa24.84■■□□□ 1.57
CCDC78-215ENST00000538176 OPLAHO14841 1288 aa24.83■■□□□ 1.57
CCDC78-215ENST00000538176 ERICH6BQ5W0A0 696 aa24.83■■□□□ 1.57
CCDC78-215ENST00000538176 CCDC62Q6P9F0 684 aa24.83■■□□□ 1.57
CCDC78-215ENST00000538176 DHX32Q7L7V1 743 aaKnown RBP24.83■■□□□ 1.57
CCDC78-215ENST00000538176 SKAP1Q86WV1 359 aa24.83■■□□□ 1.57
CCDC78-215ENST00000538176 LTBP2Q14767 1821 aa24.83■■□□□ 1.57
CCDC78-215ENST00000538176 CD4P01730 458 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 FPGSQ05932 587 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 SLC35G1Q2M3R5 365 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 TMEM63BQ5T3F8 832 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 MFSD5Q6N075 450 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 SEPT14Q6ZU15 432 aa24.82■■□□□ 1.56
CCDC78-215ENST00000538176 MTG1Q9BT17 334 aaPredicted RBP24.82■■□□□ 1.56
CCDC78-215ENST00000538176 SOX1O00570 391 aaPredicted RBP24.81■■□□□ 1.56
CCDC78-215ENST00000538176 GH1P01241 217 aa24.81■■□□□ 1.56
CCDC78-215ENST00000538176 SUPT20HL2P0C7V6 817 aa24.81■■□□□ 1.56
CCDC78-215ENST00000538176 EIF2AK2P19525 551 aaKnown RBP24.81■■□□□ 1.56
CCDC78-215ENST00000538176 PURAQ00577 322 aaKnown RBP24.81■■□□□ 1.56
CCDC78-215ENST00000538176 FANCBQ8NB91 859 aa24.81■■□□□ 1.56
CCDC78-215ENST00000538176 PDCD2LQ9BRP1 358 aa24.81■■□□□ 1.56
CCDC78-215ENST00000538176 BAZ2BQ9UIF8 2168 aaKnown RBP24.81■■□□□ 1.56
CCDC78-215ENST00000538176 TGFB3P10600 412 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 ITGB8P26012 769 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 VSIG10LQ86VR7 867 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 TMEM199Q8N511 208 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 CUL5Q93034 780 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 LRCH3Q96II8 777 aa24.8■■□□□ 1.56
CCDC78-215ENST00000538176 EPB41L2O43491 1005 aaKnown RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 STAM2O75886 525 aa24.79■■□□□ 1.56
CCDC78-215ENST00000538176 REC8O95072 547 aa24.79■■□□□ 1.56
CCDC78-215ENST00000538176 MYL3P08590 195 aa24.79■■□□□ 1.56
CCDC78-215ENST00000538176 EXOSC10Q01780 885 aaKnown RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 PTPN11Q06124 597 aaPredicted RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 PPIGQ13427 754 aaKnown RBP eCLIP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 SHHQ15465 462 aa24.79■■□□□ 1.56
CCDC78-215ENST00000538176 EMID1Q96A84 441 aaPredicted RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 MYL10Q9BUA6 226 aa24.79■■□□□ 1.56
CCDC78-215ENST00000538176 RBM28Q9NW13 759 aaKnown RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 DDX41Q9UJV9 622 aaKnown RBP24.79■■□□□ 1.56
CCDC78-215ENST00000538176 CCND2P30279 289 aa24.78■■□□□ 1.56
CCDC78-215ENST00000538176 HOXA13P31271 388 aaPredicted RBP24.78■■□□□ 1.56
CCDC78-215ENST00000538176 LAMC2Q13753 1193 aa24.78■■□□□ 1.56
CCDC78-215ENST00000538176 PGM5Q15124 567 aa24.78■■□□□ 1.56
CCDC78-215ENST00000538176 MRVI1Q9Y6F6 885 aa24.78■■□□□ 1.56
CCDC78-215ENST00000538176 GRIN2DO15399 1336 aa24.78■■□□□ 1.56
CCDC78-215ENST00000538176 PIK3CDO00329 1044 aa24.77■■□□□ 1.56
CCDC78-215ENST00000538176 ARIH2O95376 493 aa24.77■■□□□ 1.56
CCDC78-215ENST00000538176 CASTP20810 708 aaKnown RBP24.77■■□□□ 1.56
CCDC78-215ENST00000538176 PTGS1P23219 599 aa24.77■■□□□ 1.56
CCDC78-215ENST00000538176 LY6KQ17RY6 165 aa24.77■■□□□ 1.56
CCDC78-215ENST00000538176 NFRKBQ6P4R8 1299 aa24.77■■□□□ 1.56
CCDC78-215ENST00000538176 TEX2Q8IWB9 1127 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms