RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ERCC5P28715 1186 aaPredicted RBP12.1□□□□□ -0.47
CLIP1-210ENST00000538120 ICA1Q05084 483 aa12.1□□□□□ -0.47
CLIP1-210ENST00000538120 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
CLIP1-210ENST00000538120 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
CLIP1-210ENST00000538120 NFE2L3Q9Y4A8 694 aa12.1□□□□□ -0.47
CLIP1-210ENST00000538120 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
CLIP1-210ENST00000538120 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 UBE2SQ16763 222 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 CT47A1Q5JQC4 288 aaPredicted RBP12.09□□□□□ -0.47
CLIP1-210ENST00000538120 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
CLIP1-210ENST00000538120 MTMR9Q96QG7 549 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 CSRNP1Q96S65 589 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 F5H6K3 240 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 GH2P01242 217 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 TXLNAP40222 546 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 STAT6P42226 847 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 SLC1A4P43007 532 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 UBASH3AP57075 661 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 GSDMDP57764 484 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 KLRC3Q07444 240 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
CLIP1-210ENST00000538120 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 SAMSN1Q9NSI8 373 aaKnown RBP12.09□□□□□ -0.47
CLIP1-210ENST00000538120 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
CLIP1-210ENST00000538120 KIF13BQ9NQT8 1826 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 SLC37A4O43826 429 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 TDP2O95551 362 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 NDUFB10O96000 172 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 SERPINC1P01008 464 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 RRAGBQ5VZM2 374 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 FAM151AQ8WW52 585 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 NUP88Q99567 741 aaPredicted RBP12.08□□□□□ -0.48
CLIP1-210ENST00000538120 MMTAG2Q9BU76 263 aaKnown RBP12.08□□□□□ -0.48
CLIP1-210ENST00000538120 KCND1Q9NSA2 647 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 UBA7P41226 1012 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.48
CLIP1-210ENST00000538120 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
CLIP1-210ENST00000538120 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 AK8Q96MA6 479 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 PLIN2Q99541 437 aa12.08□□□□□ -0.48
CLIP1-210ENST00000538120 RPN1P04843 607 aaKnown RBP12.07□□□□□ -0.48
CLIP1-210ENST00000538120 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLIP1-210ENST00000538120 TECP42680 631 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 TGFB2P61812 414 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 GOLGA8FQ08AF8 430 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 GOLGA8DPQ0D2H9 430 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 CABP7Q86V35 215 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 KCNV2Q8TDN2 545 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 ZBED3Q96IU2 234 aaPredicted RBP12.07□□□□□ -0.48
CLIP1-210ENST00000538120 L2HGDHQ9H9P8 463 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLIP1-210ENST00000538120 KBTBD4Q9NVX7 518 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 HERC5Q9UII4 1024 aaKnown RBP12.07□□□□□ -0.48
CLIP1-210ENST00000538120 HDAC9Q9UKV0 1011 aa12.07□□□□□ -0.48
CLIP1-210ENST00000538120 FANCGO15287 622 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 CBFA2T2O43439 604 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 KLRC4O43908 158 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 STX17P56962 302 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 CXCL9Q07325 125 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 CDC37Q16543 378 aaPredicted RBP12.06□□□□□ -0.48
CLIP1-210ENST00000538120 SPATA1Q5VX52 437 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
CLIP1-210ENST00000538120 VSTM4Q8IW00 320 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 MTMR14Q8NCE2 650 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 FBXO41Q8TF61 875 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 CUL5Q93034 780 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 PSTPIP2Q9H939 334 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 PLCG1P19174 1290 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 TNNI2P48788 182 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 MRPL12P52815 198 aaKnown RBP12.06□□□□□ -0.48
CLIP1-210ENST00000538120 SNAP25P60880 206 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 KIAA1755Q5JYT7 1200 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 KLHL10Q6JEL2 608 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 NIM1KQ8IY84 436 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 AGBL3Q8NEM8 1001 aa12.06□□□□□ -0.48
CLIP1-210ENST00000538120 ERICH4A6NGS2 130 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 H2AFXP16104 143 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-210ENST00000538120 TXKP42681 527 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 CAMK2BQ13554 666 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 CALCRLQ16602 461 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 ZNF658Q5TYW1 1059 aaPredicted RBP12.05□□□□□ -0.48
CLIP1-210ENST00000538120 CDKAL1Q5VV42 579 aa12.05□□□□□ -0.48
CLIP1-210ENST00000538120 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms