RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 RAB21Q9UL25 225 aa23.96■■□□□ 1.43
TRIM3-214ENST00000536344 EGFRP00533 1210 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 ZNF543Q08ER8 600 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 NBPF9Q3BBW0 867 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 CCDC84Q86UT8 332 aaPredicted RBP23.95■■□□□ 1.42
TRIM3-214ENST00000536344 RIN2Q8WYP3 895 aaPredicted RBP23.95■■□□□ 1.42
TRIM3-214ENST00000536344 RABEP2Q9H5N1 569 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 JMJD4Q9H9V9 463 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 M0R2N6 131 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 STX10O60499 249 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 PPP1R11O60927 126 aaPredicted RBP23.95■■□□□ 1.42
TRIM3-214ENST00000536344 DALRD3Q5D0E6 543 aaKnown RBP23.95■■□□□ 1.42
TRIM3-214ENST00000536344 SOGA3Q5TF21 947 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 CCDC148Q8NFR7 591 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 LZTS2Q9BRK4 669 aa23.95■■□□□ 1.42
TRIM3-214ENST00000536344 RNF216Q9NWF9 866 aaPredicted RBP23.95■■□□□ 1.42
TRIM3-214ENST00000536344 PLIN4Q96Q06 1357 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 VIL1P09327 827 aaKnown RBP23.94■■□□□ 1.42
TRIM3-214ENST00000536344 ATP2C1P98194 919 aaPredicted RBP23.94■■□□□ 1.42
TRIM3-214ENST00000536344 ICA1Q05084 483 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 UBE2SQ16763 222 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 ABCB5Q2M3G0 1257 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 MRIQ9BWK5 157 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 POLD1P28340 1107 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.94■■□□□ 1.42
TRIM3-214ENST00000536344 TRMT44Q8IYL2 757 aaKnown RBP23.94■■□□□ 1.42
TRIM3-214ENST00000536344 EHD4Q9H223 541 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 RIOX1Q9H6W3 641 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 SH3GLB2Q9NR46 395 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 ZNF70Q9UC06 446 aaPredicted RBP23.94■■□□□ 1.42
TRIM3-214ENST00000536344 ZNRF3Q9ULT6 936 aa23.94■■□□□ 1.42
TRIM3-214ENST00000536344 EIF3JO75822 258 aaKnown RBP23.93■■□□□ 1.42
TRIM3-214ENST00000536344 TUBE1Q9UJT0 475 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 FAM237AA0A1B0GTK4 181 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 SLC1A4P43007 532 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 POSTNQ15063 836 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 ZYXQ15942 572 aaKnown RBP23.93■■□□□ 1.42
TRIM3-214ENST00000536344 HSP90B2PQ58FF3 399 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 TADA2BQ86TJ2 420 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 NOA1Q8NC60 698 aaKnown RBP23.93■■□□□ 1.42
TRIM3-214ENST00000536344 MSANTD4Q8NCY6 345 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 GDAP1L1Q96MZ0 367 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 GMLQ99445 158 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 ZMYND12Q9H0C1 365 aa23.93■■□□□ 1.42
TRIM3-214ENST00000536344 ACTN4O43707 911 aaKnown RBP23.92■■□□□ 1.42
TRIM3-214ENST00000536344 CCNT1O60563 726 aaKnown RBP23.92■■□□□ 1.42
TRIM3-214ENST00000536344 LIG3P49916 1009 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 RASSF7Q02833 373 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 IKQ13123 557 aaPredicted RBP23.92■■□□□ 1.42
TRIM3-214ENST00000536344 RAD9BQ6WBX8 426 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 CPLX3Q8WVH0 158 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.92■■□□□ 1.42
TRIM3-214ENST00000536344 CDC23Q9UJX2 597 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 GOLGA6L9A6NEM1 432 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 ECE1P42892 770 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 NT5C2P49902 561 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 ASPRV1Q53RT3 343 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 ZNF569Q5MCW4 686 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 TMOD2Q9NZR1 351 aa23.92■■□□□ 1.42
TRIM3-214ENST00000536344 RNF40O75150 1001 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 SNHG28P0DPA3 235 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 MDM2Q00987 491 aaPredicted RBP23.91■■□□□ 1.42
TRIM3-214ENST00000536344 SLFN13Q68D06 897 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 MMS22LQ6ZRQ5 1243 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 BLZF1Q9H2G9 400 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 C6orf50Q9HD87 102 aa23.91■■□□□ 1.42
TRIM3-214ENST00000536344 FMR1Q06787 632 aaKnown RBP eCLIP23.9■■□□□ 1.42
TRIM3-214ENST00000536344 C4orf32Q8N8J7 132 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 FAM71BQ8TC56 605 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 TBCKQ8TEA7 893 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 CCDC17Q96LX7 622 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 TAOK3Q9H2K8 898 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 A0A1W2PRG0 241 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 NFKBIEO00221 500 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 COBLO75128 1261 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 PPFIA4O75335 1185 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 KIF4BQ2VIQ3 1234 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 FBXW10Q5XX13 1052 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 SPECC1LQ69YQ0 1117 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 MCTP2Q6DN12 878 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 TATDN1Q6P1N9 297 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 ZNF579Q8NAF0 562 aaKnown RBP23.9■■□□□ 1.42
TRIM3-214ENST00000536344 GJA10Q969M2 543 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 KANSL2Q9H9L4 492 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 HDAC9Q9UKV0 1011 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 ERLIN1O75477 346 aa23.9■■□□□ 1.42
TRIM3-214ENST00000536344 SMYD4Q8IYR2 804 aaPredicted RBP23.9■■□□□ 1.42
TRIM3-214ENST00000536344 REXO1Q8N1G1 1221 aaKnown RBP23.9■■□□□ 1.42
TRIM3-214ENST00000536344 SYF2O95926 243 aaKnown RBP23.89■■□□□ 1.42
TRIM3-214ENST00000536344 EFCAB13Q8IY85 973 aa23.89■■□□□ 1.42
TRIM3-214ENST00000536344 FERMT2Q96AC1 680 aa23.89■■□□□ 1.42
TRIM3-214ENST00000536344 MTFR1LQ9H019 292 aa23.89■■□□□ 1.42
TRIM3-214ENST00000536344 F5H6K3 240 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 KLRC3Q07444 240 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 SUGP1Q8IWZ8 645 aaKnown RBP23.89■■□□□ 1.41
TRIM3-214ENST00000536344 ACER1Q8TDN7 264 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 CXorf56Q9H5V9 222 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 MAN1B1Q9UKM7 699 aa23.89■■□□□ 1.41
TRIM3-214ENST00000536344 GJA3Q9Y6H8 435 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms