RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 DNERQ8NFT8 737 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 MPHOSPH6Q99547 160 aaKnown RBP20.13■□□□□ 0.81
CTSB-226ENST00000532656 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 PNMA2Q9UL42 364 aa20.13■□□□□ 0.81
CTSB-226ENST00000532656 XIRP2A4UGR9 3374 aa20.12■□□□□ 0.81
CTSB-226ENST00000532656 ARIH2O95376 493 aa20.12■□□□□ 0.81
CTSB-226ENST00000532656 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
CTSB-226ENST00000532656 MRPS5P82675 430 aaKnown RBP20.12■□□□□ 0.81
CTSB-226ENST00000532656 HDAC1Q13547 482 aaPredicted RBP20.12■□□□□ 0.81
CTSB-226ENST00000532656 NFRKBQ6P4R8 1299 aa20.12■□□□□ 0.81
CTSB-226ENST00000532656 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
CTSB-226ENST00000532656 TANC1Q9C0D5 1861 aa20.11■□□□□ 0.81
CTSB-226ENST00000532656 A6NJR5 290 aa20.11■□□□□ 0.81
CTSB-226ENST00000532656 PCP11498 1178 aaKnown RBP20.11■□□□□ 0.81
CTSB-226ENST00000532656 GPATCH4Q5T3I0 446 aaKnown RBP20.11■□□□□ 0.81
CTSB-226ENST00000532656 ADAMTS19Q8TE59 1207 aa20.11■□□□□ 0.81
CTSB-226ENST00000532656 ESR2Q92731 530 aa20.11■□□□□ 0.81
CTSB-226ENST00000532656 RNF41Q9H4P4 317 aaPredicted RBP20.11■□□□□ 0.81
CTSB-226ENST00000532656 KPNA6O60684 536 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 CA3P07451 260 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 ACTN1P12814 892 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 TMEM67Q5HYA8 995 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 CERS4Q9HA82 394 aa20.1■□□□□ 0.81
CTSB-226ENST00000532656 B4DLN1 442 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 RFXAPO00287 272 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 IQCF3P0C7M6 154 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
CTSB-226ENST00000532656 CDC37Q16543 378 aaPredicted RBP20.09■□□□□ 0.81
CTSB-226ENST00000532656 RETREG2Q8NC44 543 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 PNMA1Q8ND90 353 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 TBC1D5Q92609 795 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 UHRF1Q96T88 793 aaPredicted RBP20.09■□□□□ 0.81
CTSB-226ENST00000532656 FTOQ9C0B1 505 aaKnown RBP eCLIP20.09■□□□□ 0.813e-19■□□□□ 9.3
CTSB-226ENST00000532656 NOD1Q9Y239 953 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
CTSB-226ENST00000532656 ZNF213O14771 459 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 SDSP20132 328 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 RFC2P35250 354 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
CTSB-226ENST00000532656 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.81
CTSB-226ENST00000532656 LY6KQ17RY6 165 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 DGKHQ86XP1 1220 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 AFG1LQ8WV93 481 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 TAAR1Q96RJ0 339 aa20.08■□□□□ 0.81
CTSB-226ENST00000532656 KDM4AO75164 1064 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 BFSP2Q13515 415 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 CCDC62Q6P9F0 684 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 CHST3Q7LGC8 479 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 IQCA1Q86XH1 822 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 ADGRF4Q8IZF3 695 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 RGS22Q8NE09 1264 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 SLC9A7Q96T83 725 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
CTSB-226ENST00000532656 KAT14Q9H8E8 782 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 COL20A1Q9P218 1284 aa20.07■□□□□ 0.8
CTSB-226ENST00000532656 TET1Q8NFU7 2136 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 ABCB11O95342 1321 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 TRANK1O15050 2925 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 ARHGEF15O94989 841 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 MMP3P08254 477 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 TFF2Q03403 129 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 SKIV2LQ15477 1246 aaKnown RBP20.06■□□□□ 0.8
CTSB-226ENST00000532656 PTGISQ16647 500 aa20.06■□□□□ 0.8
CTSB-226ENST00000532656 SYTL5Q8TDW5 730 aaPredicted RBP20.06■□□□□ 0.8
CTSB-226ENST00000532656 TRIP12Q14669 1992 aaPredicted RBP20.06■□□□□ 0.8
CTSB-226ENST00000532656 PRRC2BQ5JSZ5 2229 aaKnown RBP20.05■□□□□ 0.8
CTSB-226ENST00000532656 B4E1Z4 1266 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 GH1P01241 217 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 COL9A1P20849 921 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 ARHGAP1Q07960 439 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 QRICH1Q2TAL8 776 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 GDF6Q6KF10 455 aaPredicted RBP20.05■□□□□ 0.8
CTSB-226ENST00000532656 CWC27Q6UX04 472 aaKnown RBP20.05■□□□□ 0.8
CTSB-226ENST00000532656 PHOSPHO2Q8TCD6 241 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 NSUN6Q8TEA1 469 aaKnown RBP20.05■□□□□ 0.8
CTSB-226ENST00000532656 NECAB3Q96P71 396 aaPredicted RBP20.05■□□□□ 0.8
CTSB-226ENST00000532656 MTCH2Q9Y6C9 303 aa20.05■□□□□ 0.8
CTSB-226ENST00000532656 TCF20Q9UGU0 1960 aaKnown RBP20.04■□□□□ 0.8
CTSB-226ENST00000532656 MYH6P13533 1939 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 KIAA1217Q5T5P2 1943 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 GTPBP6O43824 516 aaPredicted RBP20.04■□□□□ 0.8
CTSB-226ENST00000532656 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
CTSB-226ENST00000532656 TAP1Q03518 808 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 STXBP2Q15833 593 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 ASPRV1Q53RT3 343 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 KRT40Q6A162 431 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 HERC6Q8IVU3 1022 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 ARNTL2Q8WYA1 636 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 CTAGE1Q96RT6 745 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 RMDN3Q96TC7 470 aa20.04■□□□□ 0.8
CTSB-226ENST00000532656 EIF2AK2P19525 551 aaKnown RBP20.03■□□□□ 0.8
CTSB-226ENST00000532656 FBXO11Q86XK2 927 aa20.03■□□□□ 0.8
CTSB-226ENST00000532656 MCF2L2Q86YR7 1114 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms