RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.58■■□□□ 1.69
LRRK1-208ENST00000532029 CNPY2Q9Y2B0 182 aa25.58■■□□□ 1.69
LRRK1-208ENST00000532029 IGHA2P01877 340 aa25.57■■□□□ 1.68
LRRK1-208ENST00000532029 CACNB2Q08289 660 aaPredicted RBP25.57■■□□□ 1.68
LRRK1-208ENST00000532029 ASTN1O14525 1302 aa25.57■■□□□ 1.68
LRRK1-208ENST00000532029 SPDYE3A6NKU9 549 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 EIF2AK2P19525 551 aaKnown RBP25.56■■□□□ 1.68
LRRK1-208ENST00000532029 PDE4DQ08499 809 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 HSCBQ8IWL3 235 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 FAM184AQ8NB25 1140 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 BICD2Q8TD16 824 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 ZNF333Q96JL9 665 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 PXMP2Q9NR77 195 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 LCTP09848 1927 aa25.56■■□□□ 1.68
LRRK1-208ENST00000532029 K7ELQ4 463 aaPredicted RBP25.55■■□□□ 1.68
LRRK1-208ENST00000532029 MYCP01106 439 aaPredicted RBP25.55■■□□□ 1.68
LRRK1-208ENST00000532029 MAP3K21Q5TCX8 1036 aa25.55■■□□□ 1.68
LRRK1-208ENST00000532029 IWS1Q96ST2 819 aa25.55■■□□□ 1.68
LRRK1-208ENST00000532029 EHMT1Q9H9B1 1298 aa25.55■■□□□ 1.68
LRRK1-208ENST00000532029 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
LRRK1-208ENST00000532029 NRBP1Q9UHY1 535 aa25.55■■□□□ 1.68
LRRK1-208ENST00000532029 SNAI1O95863 264 aaPredicted RBP25.54■■□□□ 1.68
LRRK1-208ENST00000532029 TRIM29Q14134 588 aa25.54■■□□□ 1.68
LRRK1-208ENST00000532029 MORC4Q8TE76 937 aa25.54■■□□□ 1.68
LRRK1-208ENST00000532029 ZHX1Q9UKY1 873 aaPredicted RBP25.54■■□□□ 1.68
LRRK1-208ENST00000532029 KIF3AQ9Y496 699 aa25.54■■□□□ 1.68
LRRK1-208ENST00000532029 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.54■■□□□ 1.68
LRRK1-208ENST00000532029 RPTORQ8N122 1335 aa25.54■■□□□ 1.68
LRRK1-208ENST00000532029 FOSP01100 380 aaPredicted RBP25.53■■□□□ 1.68
LRRK1-208ENST00000532029 CYBAP13498 195 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 CCL5P13501 91 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 AP3B2Q13367 1082 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 PRAMEF19Q5SWL8 479 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 MCTP2Q6DN12 878 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 GALNT17Q6IS24 598 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 REXO1Q8N1G1 1221 aaKnown RBP25.53■■□□□ 1.68
LRRK1-208ENST00000532029 SHISA4Q96DD7 197 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 PDCD2LQ9BRP1 358 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 ABHD16BQ9H3Z7 469 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 PCDHA6Q9UN73 950 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 PCDHA8Q9Y5H6 950 aa25.53■■□□□ 1.68
LRRK1-208ENST00000532029 DDX49Q9Y6V7 483 aaKnown RBP25.53■■□□□ 1.68
LRRK1-208ENST00000532029 NR3C2P08235 984 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 EDNRBP24530 442 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 CNGA1P29973 690 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 CUL4AQ13619 759 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 ACVR2BQ13705 512 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 MTFR1Q15390 333 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 JAKMIP3Q5VZ66 844 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.52■■□□□ 1.68
LRRK1-208ENST00000532029 UNC93B1Q9H1C4 597 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 PCDHA4Q9UN74 947 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 KCNJ14Q9UNX9 436 aa25.52■■□□□ 1.68
LRRK1-208ENST00000532029 CCDC85CA6NKD9 419 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 CCND3P30281 292 aaPredicted RBP25.51■■□□□ 1.67
LRRK1-208ENST00000532029 FOSBP53539 338 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 PGM5Q15124 567 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 STXBP2Q15833 593 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 PHF20Q9BVI0 1012 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 ANO3Q9BYT9 981 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 RNF208Q9H0X6 261 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 VTA1Q9NP79 307 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 TMEM260Q9NX78 707 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 SMC3Q9UQE7 1217 aa25.51■■□□□ 1.67
LRRK1-208ENST00000532029 MYCLP12524 364 aaPredicted RBP25.5■■□□□ 1.67
LRRK1-208ENST00000532029 CCND2P30279 289 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 CLK2P49760 499 aaKnown RBP25.5■■□□□ 1.67
LRRK1-208ENST00000532029 FRMPD4Q14CM0 1322 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 EEPD1Q7L9B9 569 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 BLIDQ8IZY5 108 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 DAGLBQ8NCG7 672 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 TRPV1Q8NER1 839 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 C8orf76Q96K31 380 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 TMEM106CQ9BVX2 250 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 GJB4Q9NTQ9 266 aa25.5■■□□□ 1.67
LRRK1-208ENST00000532029 ZNF865P0CJ78 1059 aaPredicted RBP25.49■■□□□ 1.67
LRRK1-208ENST00000532029 FBXO16Q8IX29 292 aaPredicted RBP25.49■■□□□ 1.67
LRRK1-208ENST00000532029 PGBD1Q96JS3 809 aa25.49■■□□□ 1.67
LRRK1-208ENST00000532029 BRMS1Q9HCU9 246 aa25.49■■□□□ 1.67
LRRK1-208ENST00000532029 SEPT4O43236 478 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 EIF3JO75822 258 aaKnown RBP25.48■■□□□ 1.67
LRRK1-208ENST00000532029 GJB2P29033 226 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 VSIG10LQ86VR7 867 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 IL31RAQ8NI17 732 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 RASGRP4Q8TDF6 673 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 KATNBL1Q9H079 304 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 FAM184BQ9ULE4 1060 aa25.48■■□□□ 1.67
LRRK1-208ENST00000532029 ADAMTS3O15072 1205 aa25.47■■□□□ 1.67
LRRK1-208ENST00000532029 AKR1A1P14550 325 aa25.47■■□□□ 1.67
LRRK1-208ENST00000532029 KRT40Q6A162 431 aa25.47■■□□□ 1.67
LRRK1-208ENST00000532029 XRRA1Q6P2D8 792 aa25.47■■□□□ 1.67
LRRK1-208ENST00000532029 MSCO60682 206 aa25.46■■□□□ 1.67
LRRK1-208ENST00000532029 KRT2P35908 639 aa25.46■■□□□ 1.67
LRRK1-208ENST00000532029 SAFBQ15424 915 aaKnown RBP eCLIP25.46■■□□□ 1.67
LRRK1-208ENST00000532029 PCNX4Q63HM2 1172 aa25.46■■□□□ 1.67
LRRK1-208ENST00000532029 PAK6Q9NQU5 681 aaPredicted RBP25.46■■□□□ 1.67
LRRK1-208ENST00000532029 DDX20Q9UHI6 824 aaKnown RBP25.46■■□□□ 1.67
LRRK1-208ENST00000532029 LRRC37A2A6NM11 1700 aa25.46■■□□□ 1.67
LRRK1-208ENST00000532029 MCM3APO60318 1980 aa25.45■■□□□ 1.67
LRRK1-208ENST00000532029 STAM2O75886 525 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms