RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 KPNA6O60684 536 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 CA3P07451 260 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 BMP1P13497 986 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 COL9A1P20849 921 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 RFC2P35250 354 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 HAND2P61296 217 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 PTPN11Q06124 597 aaPredicted RBP16.92■□□□□ 0.3
CTSB-221ENST00000531502 NMIQ13287 307 aaPredicted RBP16.92■□□□□ 0.3
CTSB-221ENST00000531502 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 TBC1D10CQ8IV04 446 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
CTSB-221ENST00000531502 TRIP12Q14669 1992 aaPredicted RBP16.91■□□□□ 0.3
CTSB-221ENST00000531502 EPOPA6NHQ4 379 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 ARHGEF15O94989 841 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 TXNP10599 105 aaKnown RBP16.91■□□□□ 0.3
CTSB-221ENST00000531502 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
CTSB-221ENST00000531502 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 CCDC62Q6P9F0 684 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 PHOSPHO2Q8TCD6 241 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 CTAGE1Q96RT6 745 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 SLC9A7Q96T83 725 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 MTCH2Q9Y6C9 303 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 PTPRSQ13332 1948 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 XIRP2A4UGR9 3374 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 RAD50Q92878 1312 aa16.91■□□□□ 0.3
CTSB-221ENST00000531502 PCP11498 1178 aaKnown RBP16.9■□□□□ 0.3
CTSB-221ENST00000531502 ACTN1P12814 892 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 TFF2Q03403 129 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
CTSB-221ENST00000531502 CPVLQ9H3G5 476 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 CCDC171Q6TFL3 1326 aa16.9■□□□□ 0.3
CTSB-221ENST00000531502 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 TAP1Q03518 808 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
CTSB-221ENST00000531502 GPNMBQ14956 572 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
CTSB-221ENST00000531502 MICALL1Q8N3F8 863 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 NECAB3Q96P71 396 aaPredicted RBP16.89■□□□□ 0.29
CTSB-221ENST00000531502 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 MAF1Q9H063 256 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 TSPYL2Q9H2G4 693 aaPredicted RBP16.89■□□□□ 0.29
CTSB-221ENST00000531502 CERS4Q9HA82 394 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 RAPGEFL1Q9UHV5 662 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 NEDD4P46934 1319 aa16.89■□□□□ 0.29
CTSB-221ENST00000531502 KIAA1217Q5T5P2 1943 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 RRP1P56182 461 aaKnown RBP16.88■□□□□ 0.29
CTSB-221ENST00000531502 ARHGAP1Q07960 439 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 BFSP2Q13515 415 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 USH1GQ495M9 461 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 DGKHQ86XP1 1220 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 HERC6Q8IVU3 1022 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 RETREG2Q8NC44 543 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 KAT2BQ92831 832 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 TAAR1Q96RJ0 339 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 COL20A1Q9P218 1284 aa16.88■□□□□ 0.29
CTSB-221ENST00000531502 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
CTSB-221ENST00000531502 B4DLN1 442 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 MMP3P08254 477 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 KCNQ1P51787 676 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 MRPL12P52815 198 aaKnown RBP16.87■□□□□ 0.29
CTSB-221ENST00000531502 LY6KQ17RY6 165 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 KRT40Q6A162 431 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 SPRED2Q7Z698 418 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 SYTL5Q8TDW5 730 aaPredicted RBP16.87■□□□□ 0.29
CTSB-221ENST00000531502 DHX38Q92620 1227 aaKnown RBP16.87■□□□□ 0.29
CTSB-221ENST00000531502 ANKS1AQ92625 1134 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 ESR2Q92731 530 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
CTSB-221ENST00000531502 LAMA4Q16363 1823 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 BAIAP3O94812 1187 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 RBL2Q08999 1139 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
CTSB-221ENST00000531502 PTGISQ16647 500 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 GDF6Q6KF10 455 aaPredicted RBP16.86■□□□□ 0.29
CTSB-221ENST00000531502 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 FTOQ9C0B1 505 aaKnown RBP eCLIP16.86■□□□□ 0.293e-19■□□□□ 9.3
CTSB-221ENST00000531502 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
CTSB-221ENST00000531502 ABCB11O95342 1321 aa16.86■□□□□ 0.29
CTSB-221ENST00000531502 GTPBP6O43824 516 aaPredicted RBP16.85■□□□□ 0.29
CTSB-221ENST00000531502 LPXNO60711 386 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 GH1P01241 217 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 SDSP20132 328 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 AAK1Q2M2I8 961 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 SEPT14Q6ZU15 432 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 ADGRF4Q8IZF3 695 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 PNMA1Q8ND90 353 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 NSUN6Q8TEA1 469 aaKnown RBP16.85■□□□□ 0.29
CTSB-221ENST00000531502 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 ARNTL2Q8WYA1 636 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 NOD1Q9Y239 953 aa16.85■□□□□ 0.29
CTSB-221ENST00000531502 TRIM6-TRIM34B2RNG4 842 aa16.84■□□□□ 0.29
CTSB-221ENST00000531502 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
CTSB-221ENST00000531502 CXCL10P02778 98 aa16.84■□□□□ 0.29
CTSB-221ENST00000531502 WDR5P61964 334 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms