RNA–Protein interactions for RNA: ENST00000531129.5

GPATCH4-215, Transcript of G-patch domain containing 4, human

TSL 5

Gene GPATCH4, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-215	ENST00000531129	MRPS5	P82675	430 aa	Known RBP	13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	B4GALNT3	Q6L9W6	998 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	DNER	Q8NFT8	737 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TAAR1	Q96RJ0	339 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	COL20A1	Q9P218	1284 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SCN5A	Q14524	2016 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	REV3L	O60673	3130 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ZMYM6	O95789	1325 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	WDR19	Q8NEZ3	1342 aa		13.64	□□□□□ -0.23
GPATCH4-215	ENST00000531129	NKRF	O15226	690 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CA3	P07451	260 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	IQCF3	P0C7M6	154 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	LY6K	Q17RY6	165 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TMEM67	Q5HYA8	995 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CCDC62	Q6P9F0	684 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ADAMTS19	Q8TE59	1207 aa		13.63	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MUC3A	Q02505	3323 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	EPOP	A6NHQ4	379 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ZNF213	O14771	459 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KPNA6	O60684	536 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KDM4A	O75164	1064 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PFKM	P08237	780 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TFF2	Q03403	129 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CDC37	Q16543	378 aa	Predicted RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	BRDT	Q58F21	947 aa	Predicted RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	GPATCH4	Q5T3I0	446 aa	Known RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KRT40	Q6A162	431 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	NFRKB	Q6P4R8	1299 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SEPT14	Q6ZU15	432 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CHST3	Q7LGC8	479 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	DGKH	Q86XP1	1220 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ADGRF4	Q8IZF3	695 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RETREG2	Q8NC44	543 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PNMA1	Q8ND90	353 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RGS22	Q8NE09	1264 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	AFG1L	Q8WV93	481 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ESR2	Q92731	530 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	NECAB3	Q96P71	396 aa	Predicted RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CTAGE1	Q96RT6	745 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MPHOSPH6	Q99547	160 aa	Known RBP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	VAT1L	Q9HCJ6	419 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RAPGEFL1	Q9UHV5	662 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PNMA2	Q9UL42	364 aa		13.62	□□□□□ -0.23
GPATCH4-215	ENST00000531129		B4E1Z4	1266 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PC	P11498	1178 aa	Known RBP	13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ACTN1	P12814	892 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ARHGAP1	Q07960	439 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	GPNMB	Q14956	572 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PTGIS	Q16647	500 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	GDF6	Q6KF10	455 aa	Predicted RBP	13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	CWC27	Q6UX04	472 aa	Known RBP	13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SPRED2	Q7Z698	418 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PLEKHM2	Q8IWE5	1019 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KAT2B	Q92831	832 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RNF41	Q9H4P4	317 aa	Predicted RBP	13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ZSWIM5	Q9P217	1185 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SCN10A	Q9Y5Y9	1956 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RAD50	Q92878	1312 aa		13.61	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PITPNM1	O00562	1244 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	IGHD	P01880	384 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MMP3	P08254	477 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	COL9A1	P20849	921 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RFC2	P35250	354 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TAP1	Q03518	808 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PTPN11	Q06124	597 aa	Predicted RBP	13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	QRICH1	Q2TAL8	776 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TICAM2	Q86XR7	235 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	HERC6	Q8IVU3	1022 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ARNTL2	Q8WYA1	636 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	UHRF1	Q96T88	793 aa	Predicted RBP	13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KAT14	Q9H8E8	782 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	JMJD4	Q9H9V9	463 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	NOD1	Q9Y239	953 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MTCH2	Q9Y6C9	303 aa		13.6	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MYO9B	Q13459	2157 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	XIRP2	A4UGR9	3374 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129		B4DLN1	442 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	DHX16	O60231	1041 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	GH1	P01241	217 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	BMP1	P13497	986 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	EIF2AK2	P19525	551 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	KCNQ1	P51787	676 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MRPL12	P52815	198 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	MFAP1	P55081	439 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	BFSP2	Q13515	415 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SKIV2L	Q15477	1246 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	TCTN1	Q2MV58	587 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	IQCA1	Q86XH1	822 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SMC5	Q8IY18	1101 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ENAH	Q8N8S7	591 aa	Predicted RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	PHOSPHO2	Q8TCD6	241 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	NSUN6	Q8TEA1	469 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	DHX38	Q92620	1227 aa	Known RBP	13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	ANKS1A	Q92625	1134 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	SLC9A7	Q96T83	725 aa		13.59	□□□□□ -0.23
GPATCH4-215	ENST00000531129	RMDN3	Q96TC7	470 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms